Coregonus clupeaformis (lake whitefish): 121578178
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Entry
121578178 CDS
T08357
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121578178
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121578178
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
121578178
NCBI-ProteinID:
XP_041748288
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All DBs
Position
1:87501225..87544407
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AA seq
880 aa
AA seq
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MNSVRATSRRPRRVSRPRPVQPERNNQERDEDVPAEMVAEESGPGAQNSPYQLRRKSLLP
KRTAACPAKTNMEGASTSATEDFGHRAKRARVSGKSQDLTAAPAEHYLQEKLPDEVVLKI
FSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEAGKFFQINPEEYE
QPNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGL
IFVHSGVYTDEWIYIESPITMIGAASGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIK
FNPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISD
CENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMG
YFESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAG
VWVTSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHN
KIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYD
NGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDN
AMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPI
LRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIE
KAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFF
CDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcaaccagcagaagacccaggcgagtgtcgaggccgcgcccggta
cagccggaaaggaacaaccaggaaagagatgaggacgtccctgcagagatggttgcagaa
gaatccggtccaggagctcagaatagtccgtaccaacttcgaagaaagtctctactaccc
aagagaacagcagcgtgtccagcaaagactaacatggagggtgcttccacttcagccaca
gaagactttggccatcgggcaaagcgtgccagagtgtcgggaaagtctcaagatttaaca
gcagctccagcagagcactacctccaggagaagctgccagacgaagtggttctgaagatc
ttctcctacctgctagagcaggacctgtgtcgcgcagcatgtgtctgcaaacgcttcagc
gaactggccaatgaccccatcctctggaagaggctgtacatggaggtgtttgagtacacg
cgtcctatgatgcatcctgaggcggggaagttcttccagattaacccagaggagtacgag
cagcctaacccgtggaaggagagctttcagcagctgtataaaggagcacacgtgaagcca
ggcttcgcagaacacttctacagtaatcctgccagatacaaaggaagagagaacatgctt
tactatgacaccatcgaggatgccctgggaggtgttcaggaagcccactttgacggactc
atattcgtccactctggggtctacactgacgagtggatctacattgagtcacccatcaca
atgatcggagctgcatctggtaaagtagcagacaaagtgatcattgagaacaccagagac
tcaacatttgtcttcatggagggctcagaggatgcatacgttggctacatgaccatcaag
tttaatcctgatgataagtctgcccagcaccacaacgcccaccactgtctggagattaca
gtcaactgcagccccatcattgaccactgcatcatacgcagcacttgcacagtgggctca
gcggtctgtgtgagcggccagggcgcttgtcccaccatcaaacactgcaacatcagcgac
tgtgagaacgtggggctttacatcaccgaccatgcacagggaatctacgaggacaatgaa
atctccaacaacgctctggcagggatctgggtgaaaaaccatggcaacccaatcatcaga
cggaaccacatccaccacggcagagacgtgggtgtcttcaccttcgaccacggcatgggc
tactttgagagctgcaacatccacaggaaccgcatagctggctttgaggtgaaggcgtac
gccaaccccacagtggtgcgctgtgagatccaccacggacaaacaggagggatctacgtg
cacgagaagggccgaggacagttcatcgagaacaagatctatgcaaacaactttgctgga
gtgtgggtcacctccaacagcgatcctacaataaggggtaacgccatcttcaacggtaac
cagggtggcgtttacatattcggtgacggccgaggcctcatcgaggggaatgatatctac
ggtaatgccttggcagggatccagatcaggacgaacagctgccctatcgtacgacacaat
aagatccacgacggacagcacgggggcatctatgtgcacgaaaagggacagggggtgatc
gaggagaacgaggtgtacagcaacacgctggcaggagtctgggtgaccaccggaagcaca
cctgtcctcaggaggaacaggatacacagtgggaaacaggttggcgtttacttctatgac
aacggccatggagtgttggaggacaatgatatctacaaccacatgtactctggagttcaa
atcagaactggaagcaatcccaaaatcagacggaacaagatctggggaggtcaaaatgga
ggtattctggtttacaactcaggtttgggcttcatcgaagacaatgagatctttgacaac
gccatggcaggggtgtggataaagacggacagcaaccccaccctccggaggaataagatc
cacgacgggagagacggagggatctgtatattcaacggaggacgaggtttactggaggag
aacgatatcttcaggaacgcccaggcaggagtcctcatcagcaccaacagccatcccatc
ctgaggaagaacaggatatttgacggcttcgctgcaggtattgagatcaccaatcatgcc
acggcaaccctggagggcaatcagatcttcaacaaccgctttggagggttgtttctcgca
tcgggtgtcaacgttacaatgaaagataacaaaataatgaacaatcaagatgccattgaa
aaagctgtgagcagaggtcagtgcctgtacaagatttccagttacaccagctatccaatg
cacgatttttacaggtgtcacacctgtaacacaacagaccgcaacgccatctgtgtgaac
tgcatcaagaagtgccaccaggggcacgacgttgagttcattaggcatgatagatttttc
tgtgactgtggagccggaacattgtcaaacccctgcacgctagccggagagcccacgcac
gacacggacacactgtacgactccgcccctcctatagagtccaatacgctgcaacacaac
tga
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