KEGG   Coregonus clupeaformis (lake whitefish): 121578210
Entry
121578210         CDS       T08357                                 
Name
(RefSeq) integrin alpha-9-like
  KO
K06585  integrin alpha 9
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04514  Cell adhesion molecules
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121578210
   04514 Cell adhesion molecules
    121578210
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121578210
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121578210
   04810 Regulation of actin cytoskeleton
    121578210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121578210
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121578210
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha SARA
Other DBs
NCBI-GeneID: 121578210
NCBI-ProteinID: XP_041748348
LinkDB
Position
1:87881646..88106065
AA seq 1026 aa
MGHFMNQKRSLLDVFCVYLSVSVVHSYNIDLEHAIVFRGPDSSFFGYSVLEHYHDNTRWV
LVGAPKANSSYSSSLHTPGAVFKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQGDRDDE
WMGVSLARQDKPNGKILACAHRWKNVFYDSEHILPHGYCSIIPPTLQGRTQALIPCYEDY
KQKYGEEHGSCQAGMAGVFTEELVIMGAPGSYYWTGTVKVYNLSSNTFYNPNKVDVDSHR
YSYLGYAVTAGHFSSPNVIDVAAGAPQHGGEGKVYIFRIDGVSLVKIFQASGKMMGSYFG
SSLCGVDLNLDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEEAGLLNGDDAYSAHFG
ECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDVTGIVTKYSMRLSGQSISPALQM
FGQSISGNVDMDSNGYPDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQCHEG
PQHLNCFNATVCLLFRGKHLPEHIELLYNLTADVDKRQRTQSSRVYFIQNGAQISSVSNE
LSLDINREDCQQYTAYVKKDVKDVFTAITFEVAYTLGKHVVDGHLDKDLPALTPVLRWRK
GDKMAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHMRSQLAIGGVRNVSLNVTISNAG
DDAYDTNIYFKFSREVFYINYWQKEEKGISCGLVDLDFLQCSVGFPFMRAQTKYHLAVIF
DTSQLSGENETLQFLVHAKSANPEHRLLDNTLDLSIPLVHEVDTTITGLVTPTSFVYGNS
IDASHFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFHIMDTQ
VAEGQGNCTSHRNTQPCSIPQDRESIFHTMFAFFTKSGRRVLDCDRPGRACLTISCTLGS
QSKEEAVSIDVKLLLNTEILKRDSSSLIQFVTRGNVRVDGRAIEVLQGLPEDTSLVFEAL
HSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYQEIIEAEKNRKDSDESWD
WVEKNH
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgggtcattttatgaatcagaagaggagccttttggatgttttctgcgtgtatttgtct
gtttctgtagttcactcctacaacattgacttagaacatgctattgtgttccgtggacct
gactcgagtttctttggatactctgttctggagcactatcatgacaatacgcgctgggtt
ctggtaggggcccccaaggccaactcttcctacagcagctcactccacaccccgggagcc
gtgttcaagtgccgtgtccacagcaacccagagagacgctgcacggagatggacctgggc
agagggaataagccccgggagtcttgtgggaagacgtgccagggagacagggatgatgag
tggatgggggtcagcctcgcccggcaggacaaacccaacggcaaaatactggcctgtgcc
caccgttggaagaatgtcttctatgactctgagcatatcctaccccatggttactgttcc
atcatccctcctacgctacagggccggacccaagccctcatcccctgctacgaagactat
aagcagaagtatggggaagagcacggctcgtgccaagcggggatggcaggcgtttttact
gaggagctggtgattatgggagctccaggatcatactattggacaggaacagtcaaggtc
tacaacctgtcctccaacacgttctacaaccccaacaaagtagacgtcgactcacacaga
tacagctatctaggctatgctgtgactgctggacacttctcctctcctaatgtcatagat
gtggctgcaggagctccacaacacggtggagaggggaaagtttacatttttagaatcgat
ggtgtgtctttggtgaagatctttcaggcctcagggaaaatgatgggctcttactttggc
tcctcattgtgtggagttgatctgaacctggacggcctgtcggacctgctggttggagcg
cccatgcacagcacactacgggacgagggacaggtctctgtctacctcagcaagggcaac
ggggtgatggaggaggctggactcttaaatggagatgatgcctacagtgcacactttgga
gagtgcatcactgcaatcggagacatcgatgacgatggataccaagatgtggccatagga
gcacccaaagaagatgactacggtggagcggtctacatttaccatggtgatgtcacagga
atcgtcaccaaatattctatgagactgtctggacagagcattagccccgccctccagatg
ttcggccaatcaatctctggcaatgtggacatggacagcaatggatatccagatattacc
attggtgcgtttatggctgatagcgtggtgttattgaggtcccggccggtgatcactgtg
gacgtgtccatctacctgcctgtctccatcaacatctccgtacctcagtgtcacgaggga
ccacagcacctcaactgtttcaatgctacagtctgtctgctcttcagaggaaaacacctg
ccagaacacatagagttgctgtataacctgacagctgatgtggataagaggcagaggacc
cagtcttccagagtgtactttattcagaacggagcccagatcagctctgtgagcaacgag
ctcagtctggacatcaacagagaggactgccaacagtacactgcatatgttaagaaggac
gtgaaagacgtattcacagccatcacctttgaggtggcctacaccctggggaagcatgtg
gtggacggacacctggacaaagacctgcctgctctcacacctgtactacgctggaggaaa
ggagacaagatggcagcaaagaatgagacatggtttgagaagaactgcctgtctgatgac
tgtgctgctgacctgagactccatgggaaactgctgctttctgggctccacatgcggtct
cagctagccataggaggagtgaggaacgtctctctgaacgtgaccatctccaacgcaggg
gacgatgcctacgacaccaacatctacttcaaattctcaagagaggtcttctatatcaac
tactggcagaaggaagagaagggtatttcctgtggtcttgttgatttagacttcctccaa
tgcagcgtgggatttcccttcatgagagcacagactaagtatcatcttgcagtgatcttc
gacacaagtcagctttcaggggaaaacgagacgttgcagtttttagttcatgcaaaaagt
gccaaccctgagcatagactgttggacaacacgttggatctgtctatcccactggtccat
gaggtggacacaactatcactggtttggtgaccccaacgtcctttgtgtatgggaactcc
atcgatgcctcgcactttgtccagctggaggacatggagtgtaacttccagcctctaaac
ttcacctttcaggtgatcaacaatggccccagcaggttacctggctccatagtggacatc
aggatccccaaccgactggctggcaacggggccgacatgttccacatcatggacacacag
gtggcggaggggcaagggaactgcacctcccataggaacacccagccctgttccatcccc
caggacagagagagtatcttccacaccatgttcgcattcttcaccaagtctggacgcagg
gtcctggactgtgaccggccagggagagcatgtttaaccatctcatgtactctgggctcc
cagtccaaagaggaagctgtcagtatagatgtgaaacttctactaaacacagagatactg
aagagggacagctcgtcgctgatccagttcgtgactaggggtaatgtgagagtggacggg
agggcaatagaggtactgcaggggctaccagaagacacttcactggtgttcgaggcgctc
catagccaggagccaagaggctatgttgttggttggatcattgccatcagcctacttgtg
ggaatactcatcttcctactgctggctgtgctgctctggaagatgggtttcttccgccgg
cgctaccaggagatcatcgaggccgagaagaacaggaaggacagtgacgagagctgggat
tgggtggaaaagaaccactga

DBGET integrated database retrieval system