Coregonus clupeaformis (lake whitefish): 121578242
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Entry
121578242 CDS
T08357
Name
(RefSeq) polycomb group RING finger protein 5-B isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121578242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121578242
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121578242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
RAWUL
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_6
zf-RING_10
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121578242
NCBI-ProteinID:
XP_041748390
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All DBs
Position
1:88341559..88357961
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AA seq
282 aa
AA seq
DB search
MATQRTPLVQPRLVKDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIIQHFEDSNDCPK
CGIQVHETNPLEMLRLDNTLEEIIFKLVPGLREKEQQQEIDFWRKNKSKENSQGDSLGSK
KLGLSDEEDGDEDDQDYHRSDPQIAICLDCLHNNGHAADDTVKCLMKKFIHCSSRVTVGT
IKKFLSLKLKLSSSCEGHLAILANARWAGPFFCWAGWSELTQTYYGDTAMGNFSLILVYN
EPLADQWATAGPPGFSELRSCKLAFKVKRSISKETCPDSVIS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctactcagaggacacccctggtccaacccaggctggtgaaagactttaaccacttc
attacctgctacctgtgcagaggttacctgatcaaacccaccacggtcactgagtgcctg
cacacattttgtaagagctgcatcatccagcactttgaagacagtaacgactgtcccaaa
tgtggcattcaagtccatgaaaccaaccctctagagatgctaaggttggacaatactctt
gaggaaatcattttcaagcttgtgcctggattacgagaaaaagagcaacagcaggagatt
gatttctggaggaagaataagtcaaaagaaaattcacaaggagacagccttgggtctaag
aagcttgggctcagtgatgaggaggatggggatgaagatgaccaggattaccacaggagc
gacccccagatagccatctgtctggactgtctccacaacaatggccatgctgcagatgac
acagtgaagtgtttaatgaagaagttcattcactgctctagtcgagtcacggtgggaacc
atcaagaagtttctcagtctaaagttaaagctttccagctcttgtgaggggcatctagca
attctggcaaatgccagatgggctggaccatttttttgttgggcgggctggtcagaattg
acacaaacatattatggtgacactgccatgggcaatttctctcttatactagtctataat
gagcctttggctgatcagtgggcaacggccggcccccccgggttttctgagctgaggtca
tgcaaactcgcattcaaagtcaaacgcagcatcagcaaagagacctgccctgactctgtc
atcagttag
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