Coregonus clupeaformis (lake whitefish): 121578248
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Entry
121578248 CDS
T08357
Symbol
si:dkeyp-97e7.9
Name
(RefSeq) DEP domain-containing mTOR-interacting protein
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
cclu04142
Lysosome biogenesis
cclu04150
mTOR signaling pathway
cclu04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121578248 (si:dkeyp-97e7.9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121578248 (si:dkeyp-97e7.9)
04140 Autophagy - animal
121578248 (si:dkeyp-97e7.9)
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
121578248 (si:dkeyp-97e7.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121578248 (si:dkeyp-97e7.9)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
121578248 (si:dkeyp-97e7.9)
mTORC2 complex
121578248 (si:dkeyp-97e7.9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121578248
NCBI-ProteinID:
XP_041748395
LinkDB
All DBs
Position
12:42826207..42830337
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AA seq
405 aa
AA seq
DB search
MDKMDINRKSMARLHKAKVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAQELTDWLI
SNKEAPDRATAVCLIQHLMDHDIVHHVCDKHPMFKDAKLLYRFRKDDGTFPFNTEVNVFI
RGQQLYEHLITGRDSILQLREEQGVAYQRSIPGCQLIDWLLQNGETESRRQGLEFCRALL
EHGIIQHVAKKYDFFDSRLLYQFCINFCRRRHLSELLNETERDKKEGVSVHALEDNHADS
PFVLPKIPPQEECSGFQSAVQPNKPLKMISNVHQASLNSLQLHASGYLPPATLSSAPVVR
CNPKSVLKRNVTCEELLSPGAPFIKRVLTVMGDAVGWGFVIRGMAPVYVQAVDPGSPAAA
AGVKVRQFVCQVNGRSVLHLDYRQVTRLVMTGPRTVVLEVMEPLG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatggacattaacagaaaatcaatggccagactgcacaaggctaaagttatg
attgctggagaacaactgaggttgaggctacatgatggcaaactgatcaaggatcgacgg
taccatctgcgcacttaccccaactgctttgtggcccaagagcttacagactggctgatc
agcaacaaggaagctcccgatcgggccacagcggtctgcctcatacaacacctgatggac
catgacattgtgcaccatgtttgtgacaagcaccctatgttcaaggatgcaaaattgctg
taccgtttccgtaaggatgatggcacatttccatttaacaccgaggtgaacgtcttcatc
cgaggacaacaattgtatgagcatctaataactggcagagactccattctgcaactaagg
gaggagcaaggtgttgcataccagcgctccatccctggctgccagttgatcgactggttg
ttacagaatggagagacagagagcaggcgccagggtttggagttctgccgtgctttgctg
gagcatggcatcattcagcatgtggcaaagaagtacgacttctttgacagtagattactg
tatcagttctgcatcaatttttgccgccggcgccacctgtctgagctcttgaatgaaact
gagcgagacaaaaaggaaggcgtatcagtgcatgcactggaggacaaccatgcagacagc
ccctttgtcctgcccaagatccccccacaagaggaatgcagtgggtttcaatctgcagtg
cagcccaataaaccattgaagatgatatccaatgtgcatcaggccagtttgaattctctg
cagctacatgctagtggatatttaccccctgccacactctcctctgccccagtggtgaga
tgcaatccaaaatcagtgcttaagaggaatgtgacatgtgaggagctactgtcccctggt
gcacccttcatcaagagagtgttgacggtgatgggagatgcagtgggctggggctttgtg
atcagaggtatggctccagtttacgtccaggcagttgatcctggaagccctgctgctgca
gcaggggttaaggtgcgtcagtttgtttgccaggtgaatgggcgaagcgttcttcacctg
gattaccgccaggtcaccagattggtgatgaccggacctcgcactgttgtgttggaggtc
atggaaccactggggtga
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