Coregonus clupeaformis (lake whitefish): 121578265
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Entry
121578265 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121578265
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121578265
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRR_Zer-1
V-set
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
Ig_C17orf99
LRR_NXF1-5
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
121578265
NCBI-ProteinID:
XP_041748437
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Position
12:complement(44018926..44030960)
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AA seq
720 aa
AA seq
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MAIGRFIYCLLGQLFAGLILASVGLSSIQRDNECPQLCVCEIRPWFTPQSTYREATTVDC
NDLRLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLFNLTELDLSQNNFSSIHDVGLTNM
SQLTTLHLEENQITEMPDYSLQDLSNLQELYINHNQINIISPNALSGLHNLLRLHLNSNR
LKAIDSRWFESTPNLEILMIGENPVVGILDFNFKPLVNLRSLVLAGMDLTDIPGNAFVGL
DNLESLSFYDNKLIRVPQNALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMG
ELVSIDRFAVDNLPELTKLEATNNPKFSYVNRQAFCDVPALESLMLNNNALNALYQSTVD
SLPNLREISIHSNPLRCDCVIQWMSSNKTSIRFMEPLSMFCAMPAEVRGQHVRELLQQDS
AEQCLPMISHDSFPNHLNLDIGMTVDLDCRAMSQPEPEIYWVTPVGNKVIVDTLSDKYSL
SSEGTLRISQIQVEDSGRYTCVAQNAEGADTRVTAIRVNGTLLDSTQLMKVYVKQTESHS
ILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLTV
SNIHQQTQKSCVNVTTKHAAFAVEISDQGTNIALAAVMGTMFGIISLASMAVYISKRWKR
KNYNHSLKKYMQKTSSIPLNELYPPLINLWEADSEKDKEVSSSSETKPSQVDTTRSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctatagggaggttcatctactgtctactaggccagttgtttgctggcctgattctg
gcgtccgttggactatcctccatccagagagataatgagtgtccccagctgtgtgtgtgt
gagatccgaccctggttcaccccccagtccacctacagagaagccacgacggtggactgc
aacgacctccgtctcacacgcatcccaggcaacctgtccagcgacactcaggtgctcctc
ctgcagagcaattacatcgccaggaccagtgaagagctggaacagctcttcaacctgacc
gagctggacctgtctcagaacaacttcagcagcatccacgatgtgggcctcaccaacatg
tcccagctcaccacactacaccttgaggagaaccagattactgaaatgcctgactactct
ctgcaggacctcagcaacctgcaagagctctacatcaaccataaccagatcaacataatc
tccccaaacgccctctctggtctacacaatctgctcaggctccatctcaactccaacagg
ctcaaggccattgacagtcgctggtttgagtccacgcccaaccttgagatactcatgatc
ggggaaaatcctgttgttggcatcctggactttaacttcaagccgcttgtaaacctgaga
agcttggttctggctggaatggatttaacagacatccctggaaatgcctttgtgggacta
gacaacctagagagtctctccttctacgacaataagctaatcagagttcctcagaatgcc
cttcagaaactacctaacctcaagttcttggacttgaacaaaaaccctgtgcacaaaatc
caagagggggactttaagaacatgctgaggctgaaagagctgggtattaacaacatgggg
gagctggtctccattgaccgctttgctgtcgataacctccctgagctcaccaagctggag
gctactaataaccccaagttctcctacgtgaaccgccaggctttctgtgacgtccctgcc
ctggagagcctcatgttgaacaacaatgcccttaacgccctctaccagtccaccgtggac
tccctgcccaacctgcgtgagatcagcatccacagcaaccccctgcgatgcgactgtgtc
atccagtggatgagctccaacaagaccagcatccgcttcatggaacccctctccatgttc
tgtgccatgccagccgaggtcagaggtcagcatgtgagggagttgctccagcaggactca
gcagagcagtgcctgcccatgatctcccacgacagctttcccaaccacctgaacctggac
ataggcatgactgtggacctggactgccgtgccatgtcccagcctgagccagagatctac
tgggtcacgcccgtagggaataaggtgattgtggacaccctgtctgataaatacagcctc
agtagcgagggaacgctgcgtatctctcaaatccaggtcgaggactccggcaggtatacc
tgtgtggcccagaatgctgagggggcggacactcgggtgactgctattagggtgaatggt
actctcttagacagcacccagttgatgaaagtgtacgtgaagcagactgagtcccactcc
atcctggtctcctggaaggtcaactccaacgtcatgacctccaacctcaagtggtcatct
gccaccatgaagatagacaacccccacatcacctacacagccaaggttccagtggatgtc
catgagtataacctcacacacctacagcctgccaccgagtacgaggtgtgtctcaccgtc
tccaacatccaccagcagacgcagaagtcctgtgtcaacgtcacaacgaagcacgctgcc
ttcgctgtggagatatctgaccaaggcactaacatcgctctcgcagcggtcatgggaacc
atgttcggcatcatcagcctggcctctatggctgtgtacatttccaagaggtggaagagg
aaaaactacaatcactccctgaaaaagtacatgcagaaaacatcctccatccccctcaat
gagctctaccctcccctaatcaacctgtgggaggcggacagtgagaaggacaaagaggtg
tcctcctcctcagagaccaaacccagccaggtggacacgacacggagctactacatgtgg
tga
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