Coregonus clupeaformis (lake whitefish): 121578275
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Entry
121578275 CDS
T08357
Name
(RefSeq) RING1 and YY1-binding protein B isoform X1
KO
K11469
RING1 and YY1-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121578275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121578275
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
121578275
Noncanonical PRC1 (PRC1.3/1.5)
121578275
Noncanonical PRC1 (PRC1.6)
121578275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YAF2_RYBP
HC2
Zn_ribbon_RanBP
C1_2
Motif
Other DBs
NCBI-GeneID:
121578275
NCBI-ProteinID:
XP_041748454
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All DBs
Position
12:complement(44766228..44793794)
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AA seq
442 aa
AA seq
DB search
MGDKKSPTRPKRQAKPSADDGYWDCSVCTFKNSAEAFKCSICDVRKGTSTRKPRINSQLV
AQQVAQQYAMPPPPKKERKERPEMEHGPDGELLDGEGEHPEGELPERVRPEGEEGEVEPP
LDKDQRGKEKPDKDQAEKPEKEEEKEIGKEISPARPIAKKPSIKDISPARPIAKKPSIKD
ISPARPIAKKPSNKDISPARPITKKPSIKDISPARPIAKKPSIKEISPARPIAKKPSIKD
ISPARPIAKKPSIKEISPASPIAKKPSIKEISPARPIAKKPSIKEISPARPIAKKPSIKE
ISPARPIAKKPSIKEISPARPIAKKPSIKKIRPKTDIHQSPPSIQSGESTTKTNNSHISR
PKLKNIDRSTAQQLAITVGNVTVIITDFKEKTRSSSTSSSTVTSSSGSEQRHQSSGSESM
DKSSSRASTPKGELSVGHDESF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaagaaaagccctaccaggccaaaaagacaagctaaaccaagtgctgacgac
ggatattgggactgtagcgtctgcaccttcaagaacagtgcagaggcttttaaatgcagc
atatgcgatgtgaggaagggcacatccacaaggaaacccaggatcaactcccagctggtg
gcccagcaggtggctcagcagtacgcgatgcctcccccgcccaagaaggagaggaaggag
aggcctgagatggagcacggcccggacggggagctcttggacggggagggggagcaccct
gagggagagcttccggagagagtgaggccagaaggagaagaaggagaagtagaacctccc
ctggataaagaccagagggggaaggagaagccagacaaggaccaagcagagaagccagag
aaagaggaggagaaagaaatagggaaagagatcagcccagccaggcccatcgctaagaaa
cccagcatcaaagacatcagcccagccaggcccatcgctaagaaacccagcatcaaagac
atcagcccagccaggcccatcgctaagaaacccagcaacaaagacatcagcccagccagg
cccatcactaagaaacccagcatcaaagacatcagcccagccaggcccatcgccaagaaa
cccagcatcaaagagatcagcccagccaggcccatcgctaagaaacccagcatcaaagac
atcagcccagccaggcccatcgccaagaaacccagtattaaagagatcagcccagccagt
cccatcgctaagaaacccagtatcaaagagatcagcccagccaggcccatcgccaagaaa
cccagcatcaaagagatcagcccagccaggcccattgccaagaaacccagcatcaaagag
atcagcccagccaggcccattgccaagaaacccagcatcaaagagatcagcccagccagg
cccattgctaagaaaccaagcatcaaaaagatcagacccaagacagacattcatcagagt
ccacccagcatacagtctggggagtcaacaaccaagaccaacaactctcacatctctagg
cccaaactgaagaacattgaccggagcaccgcccagcagctagccataacggtggggaac
gtgacagtcatcataacggactttaaggagaagacccgctcctcgtccacatcctcgtcc
actgtgacgtccagctccggctccgagcagcggcaccagagctccggctccgagagcatg
gacaagagctcgtctcgcgcctccacccccaaaggagagctctctgtggggcatgacgag
tccttctga
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