Coregonus clupeaformis (lake whitefish): 121578285
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Entry
121578285 CDS
T08357
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121578285
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121578285
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Contactins
121578285
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121578285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
121578285
NCBI-ProteinID:
XP_041748487
LinkDB
All DBs
Position
12:45503513..45592806
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AA seq
1022 aa
AA seq
DB search
MKMLLPWELLILLSLTDCLAERNTRHGPVFTQEPSDSIFPLRSEDNKVFINCKAKGNPDP
HYKWKVDGRDIHMDLNYNLVEGNLLINTPHATHHGGVYQCIATNAFGTIVSREAKVQFAY
LQNFSRKPRNTVSVREGQAVVLLCGPPPHNGEIKYSWVFNGRPSFLLQDTRRFISQRTGN
LYIAKVEASDVGNYTCVVRNMMTNATVYSSPTPVVLRRDAVMGEYEPKIEVQFPETLHVT
KGSSVKLECFALGNPVPSITWRRTDGNPLPGKIKINHSNGVLEIPYFRLEDAGVYECVAE
NSRGKNIAKGQLIFQSVEHLHWVQTLKDAQMAIEANLQWECRASGKPKPVYRWLKNGEPL
VLEDRILVEGGRLAVSRINLLDSGMYQCLAENEHGAIYASAELKVVASSPDFSNSPVKKS
MLIQRGGEVIMECRPHASPRASISWRRGGEFLKDSKRRTIMEDGTLRISNISESDGGRYT
CVARNPFGTSSSTGTLVVKEPTKIIVPPLSVDATVGESIVLPCEVSRDSSLDPTFRWFFN
GKLIDFNRQDHFEMIGVGSAGDLMVRNIQLKHSGKYVCMVHTVVDSVSAAADLIVRGAPG
APEGLIVGEITDSTVQLSWESGPDNHSPVITYSIQARTPFSIGWQAVRTVPDSVPGQMFH
ATVIDLNPWVDYEFRVVAINNVGVGEPSMQSKQIRTKGAVPELAPGNVSGGGGRRGELVI
QWEPIPEELQSGEEFGYVVAFRPLGTSTWKQTVLASPDASRYTFRNDSIPPLSQFEVKVG
VYNNKGEGPSSHVVVVYSAEEEPSEPPSRVWTRTLSASEIEVYWEPITQTASSWKIIGYE
VLCWEEGMQESDAEMVRVTDTAALLSGLKSSTVYLISVRAQNSAGAGPSSPAVNVTTKKP
PPSQPPGNIEWNLTNSKIFLNWEHVKAMGNESEVTGYKVLYRQNWLGKTSVVETNRTSME
LQVPSGEDYLIEIKALSGGGDGSSSGPIRIPKMSGLNSKGHFSSAPSKICAVMFFILSRL
TL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgttgccatgggaactgttaatccttctgtcactcacggactgccttgct
gagagaaacacccgccatgggcccgtcttcactcaagaaccaagtgacagcattttcccc
ttgagatctgaggacaacaaggtgttcatcaattgtaaagcaaagggaaacccagacccg
cattataaatggaaggttgatgggagagatattcacatggatttgaactacaacctggtt
gaaggaaacctgttgatcaataccccccatgcaacacatcatgggggtgtttaccagtgt
attgctaccaatgcctttggaaccatcgtcagcagggaggccaaggttcagtttgcatat
ctgcagaacttcagcagaaagcccaggaacacagtgtcagtgagagaaggccaggctgtg
gtgctactgtgtggccctccaccccataacggagagatcaaatactcgtgggttttcaac
ggacgcccaagtttcctgctgcaggatacccgccgctttatctcccagaggactggcaac
ctgtacattgccaaggtggaggcctccgatgtggggaactacacgtgtgtggtgaggaac
atgatgaccaacgccaccgtgtacagctcacccacccctgtggtgctgcgcagggacgct
gtaatgggagagtatgagccaaagatcgaagttcagttccccgaaactcttcatgtcacc
aaaggatcatcagtgaaactggaatgttttgccttaggaaacccagtgccttccatcaca
tggaggagaacagatgggaatcccctccctggcaagatcaaaatcaatcattccaacggg
gtcctggaaataccatatttcagactggaggatgctggtgtatatgagtgtgttgcagag
aactccagaggaaagaacattgccaaaggacaactcatattccagagtgttgaacatctg
cactgggtccagacgttgaaagatgctcagatggccatcgaggctaatctccagtgggag
tgcagggcgagcggtaagcctaagcctgtgtacagatggctgaagaatggggagcccttg
gtgctggaggacaggatactggtagaaggtggacgattggccgtatccaggatcaacctg
ttggactctgggatgtaccagtgtctggcagagaatgaacatggagccatctatgccagc
gctgaactcaaggttgtagcctcttcacccgacttctccaacagtcctgtgaagaagtcc
atgctgatccagagagggggggaggtgatcatggagtgccgtccccatgcgtcccctagg
gcctctatctcctggcggagagggggagagtttctgaaggacagcaagagacggaccatc
atggaggatggaactctccgtatcagcaacatcagcgaatcagacggagggaggtacacc
tgtgtggccaggaacccctttgggacatcaagcagtactggcactctggtggtgaaagag
ccaaccaagataatagttccaccgctgagtgtggatgccactgtgggagagagcatcgtg
ttgccatgtgaagtgtctcgagactcctccctggatcccacctttaggtggttcttcaac
ggaaagctcatcgatttcaaccgacaggaccactttgagatgataggagtgggatcagct
ggtgatctgatggtcaggaatattcagctaaagcattctgggaagtatgtgtgcatggta
cacaccgtggtggacagtgtctcagcagcagccgacctgattgtcagaggtgcccccggt
gccccagagggccttattgtgggggaaatcactgactccactgtccagctctcctgggag
tctgggcctgacaaccacagccctgttatcacatacagcatccaggccaggacccccttc
tccattggctggcaggccgtcaggacagttcctgattctgtgcctggacagatgtttcat
gcaacggtgatagatttgaatccctgggtggattacgaattcagggtggtggctatcaac
aatgtgggtgttggagagcccagcatgcaatccaagcagattcgaacaaaaggagcagtt
cctgaattagcaccaggtaatgtgagtggaggaggaggaaggcgaggagaactagttatc
caatgggagccgataccagaggagctacagagtggagaagaatttggatatgttgtggct
tttcgtcctcttggtacaagcacgtggaagcagactgtgctggcttcacctgatgcatca
agatacaccttcaggaacgacagcatcccacccctctcccaatttgaggtgaaagttgga
gtctacaacaacaaaggagaaggcccatctagccatgtggttgtagtgtattctgcagag
gaagagccctctgaacccccgtccagagtgtggacccggactctgtcagcctctgaaatc
gaggtgtattgggaacccatcacccagacagccagcagttggaagatcattggatatgag
gtcctttgttgggaggaggggatgcaggagagtgatgctgagatggtgagggtcacagac
actgcagctcttctctccgggctcaagagcagtactgtgtatctgatctcagtcagggcc
cagaacagcgctggagcaggtccttctagccccgcagtcaacgtcaccaccaagaaacca
ccaccaagtcaacctccagggaatattgagtggaacttgacaaactccaagatctttttg
aattgggagcatgtcaaggcaatgggaaatgagtctgaggtgacaggatataaggtgctg
taccgtcagaactggcttgggaagaccagcgttgtggagaccaacaggaccagcatggag
ctgcaggtcccctctggtgaggactacctcattgagatcaaagccttgagtggtggaggg
gatggcagcagcagtggccccataaggatcccaaagatgtctggtcttaactcaaagggc
catttcagctcagctccaagcaagatttgtgcagttatgttttttatactttcaaggtta
actttataa
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