Coregonus clupeaformis (lake whitefish): 121578292
Help
Entry
121578292 CDS
T08357
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00510
N-Glycan biosynthesis
cclu00513
Various types of N-glycan biosynthesis
cclu01100
Metabolic pathways
cclu04141
Protein processing in endoplasmic reticulum
Module
cclu_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121578292 (rpn2)
00513 Various types of N-glycan biosynthesis
121578292 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121578292 (rpn2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Mfa_like_2
Ydr279_N
Motif
Other DBs
NCBI-GeneID:
121578292
NCBI-ProteinID:
XP_041748504
LinkDB
All DBs
Position
12:45968398..45978237
Genome browser
AA seq
642 aa
AA seq
DB search
MAQPRLFSLVLLTVALGAQALTPSHHLSLSDVARLQALLSQPFTDLASAYYSIVGLSKLG
ASVADENDACHFLKAQLDPMSVDSLFFAAEASQAISDCEIPVSNETRDILLAAVSEDSTV
TQIFRAVSALSSLGLPLASQEVVGALVARIAKEDNVLAITTALQTATRLSQQAELGGILE
EIEDLAARLDDLGGVYLQFEEGLEATALFVTAAYTLSDHVDTEPPLKEDQVIQLVNSVFS
KKSWHSLSEAFSVACAAAALSNNRFQVPVIVSAQGPATVSHSQPILQLLVTDVLSNPLVS
ASVVVESAQDVASKSVILNQAPFSLRDGIFELNFMASQPASGYYQFSVAVTGDTRLVANQ
VELKVKVSTEVAITNMDLSVVDKDQSIGTKTSRVDYPFKAKGSFTADSHQNFAMTFQLVD
VNTGVELTPHQTFVRLHNPKTGQEVVFVAEPDSKNLYKFELDTAERKSEFDSMSGTYALH
LIVGDATLENPILWNVADVVLKFLDEEAPAAIQSKTLYMPKPDIQHLFREPEKKPPTVVS
NAFTALVLSPFLLLLILWFKLGANISNFSFSPSSVLFHVGHACMLGLMYVYWTHLNMFQT
LKYLAIIGSLTFLAGNRMLAQKAVKRIAAEQSSRLAKYRSLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacctcgtttgttcagcttggtcctcctcacagtggctctcggagcccaggct
ctgaccccgtcccatcacctctccctgtcagacgttgcgagacttcaagccctcctgagc
caacccttcacagacctggcatcagcatactactcgattgttggtctgagcaagcttgga
gcctcagttgctgatgaaaatgatgcctgtcatttcctgaaggcccaactggaccccatg
agtgtcgactccctcttcttcgctgctgaggccagtcaggccatctcagactgcgagatc
ccggtgtccaatgagacccgtgacatccttctggcagcagtcagcgaggactctacagtc
acacagatcttcagagctgtcagcgccctcagttccctagggcttcctctggcttcacag
gaagttgtcggtgccctggtcgcgcgtattgccaaggaggacaacgtcttggcgatcacc
acggcactccagactgccacccgtctctcccagcaggctgagctcggaggaatcctggag
gagattgaggatcttgcagcacgattggatgacttgggtggagtgtacctccagttcgag
gagggacttgaggcaactgccctgtttgtgacagcagcctacactctctcagaccatgtg
gacacagagcctcctctgaaagaggaccaggtgatccagttggtgaactctgtgttcagt
aagaagtcctggcactccctgtctgaggcgttcagcgtagcatgtgctgctgccgccctc
tccaacaaccgctttcaggtgccagtcatcgtcagcgcccaggggcctgccaccgtctcc
cacagtcagccaatcctgcagcttctagtgactgacgtcctctccaatcctcttgtatca
gccagtgtggtggtggaatctgctcaagatgtggcctctaagagcgtcatactcaaccag
gcacctttctccctcagagatggcatttttgaactgaacttcatggccagccagccagca
agtggatattaccagttctctgtggctgtcaccggggacacccgattggttgccaatcag
gttgagctaaaagtgaaggtgtccactgaggtggccatcacaaatatggacctgtctgta
gtggataaggaccagagcatcggcaccaagacatccagggtggactatcccttcaaggca
aagggttcctttactgcagacagccaccagaactttgccatgactttccagttagtggat
gtcaacactggagtagagctcaccccccaccagacctttgtgaggttgcacaatccgaaa
actggccaggaggttgtgtttgttgctgagcctgacagtaagaacctttacaagtttgag
ctggacacagcagagcggaagtctgagtttgattcgatgtctggaacatatgccctccac
ctcatcgtgggagatgccaccttggagaaccccattctgtggaacgtggctgatgttgtc
ctgaagttccttgatgaggaggccccagcagccattcagtctaagaccctttacatgccc
aaaccagatatccagcacttgttccgggagcctgagaagaagccacccacagtggtgtcc
aacgccttcacagccctcgtcctttcaccattcctgctgctgcttattctgtggttcaaa
ctcggggccaacatctcaaactttagcttctcccccagctctgtcctcttccatgtgggc
cacgcatgcatgctgggactgatgtacgtctactggactcacctcaacatgttccagacc
ctcaagtacctggccatcatcggcagtctcaccttcctggctggaaaccgcatgctagcc
cagaaagcagtcaagaggattgccgcagaacaaagtagtaggttggcaaagtataggagc
ctgcggtaa
DBGET
integrated database retrieval system
