Coregonus clupeaformis (lake whitefish): 121578298
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Entry
121578298 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T-like
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121578298
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121578298
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121578298
BRITE hierarchy
Motif
Pfam:
Y_phosphatase
MAM
fn3
DSPc
TM_ErbB1
Pur_ac_phosph_N
PTPlike_phytase
Y_phosphatase3
ig
Ig_2
I-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
121578298
NCBI-ProteinID:
XP_045079927
LinkDB
All DBs
Position
12:complement(57309434..57820088)
Genome browser
AA seq
1498 aa
AA seq
DB search
MDKGNYIIAALLFQLLDLICGQFFPGSCSFEEHYSSCGYSVALGTNGFAWEQVNTWERPT
MDAAVPTGSFMVVNGSGRASGQKAHLLLPTLKENDTHCIDFHYSLSSRDGSSPGALNVYI
KVNGGSQGNPVWNASASVTEGWVKTELAISTFWPNSYQVIFETVSVQGHPGFIAVDEVRV
LAHPCRKAPHFLRLQNVEVNVGQNATFQCTAGGKWSQHDQLWLQQWNGKDTALMVTRVVN
HRRFSATVSVGDTSQRSTSRYRCVIRSDGGSGVSNYAELIVKAPPTPIAPPELLAVGATY
LWIKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDAPTYKLWHLDPDVEYEIKVLLTR
PGEGGTGPPGPPLITRTKCADPVNGPQNVNVVDIRARQLTLQWETFGYAVTRCHSYNLTV
HYQYVFNQQEFAAEELIQTSSHYTLRGLRPFVTVRLRLVLANPEGSKESEEIVKQTEEDV
PGSVPMESTQTGPYEEKIFMQWKAPNETNGIITLYEITYKALSSLDPSADLTTQRGRVFK
LRNETHHLFVGLYPGTTYFFTLKASTNKGFGPPVTTRIATKIAAPSMPEYETDTPPLNET
DTTITVLLKPAQSRGAPVSVYQLVVKEERKQKVRRAADVQECFPVPVSFKNASILDSPHY
FAAELPPTYLTVVQPFTIGDNKTYNGYWNPPLSSSKSYSIYFQALSKANGETKINCVRLA
IKVVIGRGQNTTPYILVIPSEGASTQDSDAVEPEKQVDSTVKMAGVIAGILMFVIILLGV
VLTFKRREIHTWRTLSVGKLAKKQKETASSSTQREMGPVGTADKSTTKVSTLHKDDPFST
SSQDLNGFTSPSPCSFSVQGKTLQSKSLLNSYYSVSKEAVAVPATASIDSSHSELAQPSL
TIQTYPYGGCESVEMSYQAGQFQPAIRVADLLQHITQMKCGQGYGFKEEYEGLTEGQAAP
WETAKKDENRNKNRYGNIIAYDHTRVRLQLLDGDPHSDYINASYIDGYHRPRHYIATQGP
MQETVRDFWRMIWQENSVSIVMVTNLVEVGRVKCVRYWPDETDVYGDIKVTLIETEPLAE
YVIRTFTVQKKGHHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPNAGPIVAH
CSAGAGRTGCFIAVDIMLDMAENEGVVDIFNCIRELRSQRVNMVQTEEQYVFVHDAILEA
FLCGNTVIPVCEFRAIYYNIIRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSVGLLPRNH
DKNRSMDVLSVDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTAADFWRL
VFDYNCSSIVMLNEMDAAQLCMQYWPEKSSCCYGPVQVEFISADIDEDIINRIFRICNMA
RPQDGYRLVQHFQFIGWPAYRDTPLSKRSILQLVRRLAKWQEQYDGGDGRTVVHCLMGGG
RSGTFCAICSISEMIQQQNIVDVFHTVKTLRNNKSNMVETMEQYKFCYEVALEALSSF
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagggaactacatcattgctgcacttctttttcaactgctggacttaatatgt
ggccagttctttccaggcagctgttcatttgaagagcactacagcagctgtggctacagt
gtggccctggggaccaatggcttcgcctgggagcaagtcaacacttgggagaggcccacc
atggatgcagctgttcccacaggttctttcatggtggtgaacggctcgggccgggcgtcg
ggacagaaggcccacctgctcctgcctaccctgaaggagaacgacacacactgcatcgac
ttccactactctctgtccagccgtgacggctccagtcctggggcgctcaacgtctacatc
aaggtgaacggcggctcccaaggaaaccctgtgtggaacgcctccgcctctgtgaccgag
ggctgggtcaagaccgagctggccatcagcaccttctggcccaactcctatcaggtgata
ttcgagactgtatccgtacagggccatccagggttcatcgcggtggacgaggtccgagtg
ttggcccacccatgccggaaagcgcctcacttcctgcggctgcagaatgtggaggtgaac
gtgggccagaacgccaccttccaatgtaccgccggggggaagtggtcacaacacgaccaa
ctgtggctacagcagtggaacggtaaagatacagccctcatggtgacacgggtggtgaac
caccggcgtttctcagccaccgtcagcgtcggggacacgtctcagagaagcaccagccgc
tatcgctgtgtcatccgctccgatggtggctccggggtctccaactacgcagagctaatc
gtcaaagctccccccacgcccattgcccctccggagctcctggcggtgggggccacctac
ctgtggatcaagcccaatgccaactccatcatcggggacggccctatcatcctgaaggag
gtggagtaccgcaccaccacgggcaactgggccgagacccacattgtggacgcccccacc
tacaagctttggcatttggaccccgacgtggagtacgagatcaaggttctgctgacccgg
ccgggcgaggggggcacgggacccccaggacctccactcatcacccggaccaagtgtgct
gacccagtcaacgggcctcagaatgtcaatgtggtggacatccgggcccgccagctcacc
ctgcagtgggagacgtttggctacgccgtgactcgctgccacagctacaatctgaccgtg
cattaccagtacgtgttcaaccagcaggagtttgcggccgaggaattgatccagacgtca
tcccactacaccctgcggggcctgaggcccttcgtcaccgttcgccttcgcctggtcctt
gccaaccctgagggcagcaaggagagcgaggagatcgtcaagcagacggaggaggatgtt
cccggctctgttccaatggagtccacccagaccggaccgtacgaggagaagatcttcatg
cagtggaaggcacctaacgagaccaatggcatcatcacgctctacgagatcacctataag
gctctgagctccttggaccccagtgcagacctgaccacccagcgcggcagggtgttcaag
ctacgcaacgagacccaccacctgtttgtggggctttaccctggcaccacctacttcttc
accctcaaagccagcaccaacaaaggttttggaccccctgttaccacccgcatcgccacg
aagatagcagccccatcgatgccagagtacgagacagacacgccccctctgaacgagaca
gacaccaccatcacagttctgctgaagcctgcccaatccagaggagctcccgtcagtgtc
taccagctggtggtgaaagaggaacgcaagcagaaggtgcggcgggcagccgacgtgcag
gagtgcttccccgtccccgtcagcttcaaaaatgcctccattttggattcgccccactac
tttgcggcggagctcccgcccacctacctgactgttgtgcagcccttcaccataggcgac
aacaagacctacaacggctactggaacccccctctctcttcgtccaagagctacagcatt
tacttccaagccctgagcaaagccaatggggaaaccaaaatcaactgtgtgagactggct
attaaagtggtaataggtaggggacaaaataccacgccgtacattcttgtcattcccagt
gaaggcgcgtccacccaggactcggacgctgtggagcctgaaaagcaggtggacagcacc
gtcaagatggctggtgtcatcgcgggcatcctcatgttcgtcatcatcctactgggagtg
gttctcaccttcaaacgcagagagatacacacatggagaactctgagtgtggggaaactg
gccaaaaaacagaaggagacagccagcagcagcacccagcgggagatgggaccggtgggc
acggctgacaagagcaccaccaaagtcagcactctgcacaaggacgaccctttctccacc
agcagccaggacctcaatggtttcacgtccccctctccctgctccttctctgtgcaaggc
aaaactctgcaaagcaaatcccttttgaattcctactactcagtgtcgaaggaggctgtt
gcagtccctgcaacagcatcaatcgacagcagccatagtgagttggctcagccatcgttg
accatccagacgtacccgtacgggggctgtgagtcggtagagatgtcctaccaagcaggc
cagttccagccagccatccgtgtagccgacctcctccagcacatcacccagatgaagtgt
ggccagggctacggcttcaaggaagagtacgagggcctgacggaaggacaggcggcccca
tgggagaccgccaagaaggatgagaaccgcaacaagaaccgatacggcaacatcatcgct
tatgaccacactcgtgtcagactgcaactgctggatggagacccccactcggactacatc
aatgccagctacatagacgggtatcatagaccaagacattacatcgccacacaaggcccc
atgcaggagacggtgagagatttctggaggatgatctggcaagagaattctgtcagtatc
gtcatggttacgaacctggtggaagtgggcagggtgaagtgcgtgaggtactggcctgac
gagactgatgtgtacggagatatcaaggtgacactgattgagacagagccactggccgag
tacgtcatccgcaccttcacagtccagaagaagggccaccatgagattcgggagatccgt
caattccacttcactagctggcctgaccatggggtgccctgctatgccaccggcctcctg
ggctttgtccgccaggtcaagttcctcaaccctcccaacgccggccccatcgtggcccac
tgcagtgctggggctggaaggacaggctgtttcatagctgtggacatcatgctggatatg
gccgagaacgagggtgtggtggacatcttcaactgcatccgcgaactgcgctcacaaagg
gttaacatggtgcaaaccgaggagcagtatgtctttgtccacgatgccatcctggaagcc
ttcctgtgtggaaacacggtcatcccagtctgtgaattcagagccatatactacaacatc
atcagactggacccacagaccaactccagccaaattaaggacgagtttcagactctgaac
atcgtgactccccgggtgcggcctgaagactgtagcgtgggactgctcccccggaaccac
gacaagaaccgcagcatggacgtcctgtccgtggatcgctgcctacctttcctcatctct
gttgatggagagtccagtaactatatcaacgctgccctcatggacagccataaacagcca
gcagccttcatcgtaacccagcacccgctgcccaacacggcggccgacttctggaggctg
gtctttgactacaactgctcctcgatagtcatgctcaacgagatggatgcagcgcagctt
tgcatgcagtactggcccgagaagagctcctgctgctacggccccgtccaggtggagttc
atctcagccgacatcgatgaagacatcatcaatcgcatcttcaggatctgcaacatggcc
aggccccaggatggctaccgtttggtgcagcatttccagttcatcggctggccggcctat
cgggacacgcccctgtccaagcgctccatcctgcagctggtgagacgtctggctaagtgg
caggagcagtacgacgggggagatggacgcaccgtggtccactgcctgatgggtggtgga
cggagcggtaccttctgtgccatctgcagcatcagtgagatgatccagcagcagaacatt
gtagatgtgttccacaccgtcaagaccctgaggaacaacaaatccaatatggtggagact
atggaacagtacaagttctgctatgaagttgctctggaagcccttagctcattctga
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integrated database retrieval system
