Coregonus clupeaformis (lake whitefish): 121578319
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Entry
121578319 CDS
T08357
Name
(RefSeq) zinc finger protein GLI1-like
KO
K16797
zinc finger protein GLI1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121578319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578319
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
121578319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
121578319
NCBI-ProteinID:
XP_041748553
LinkDB
All DBs
Position
12:complement(59985321..60108230)
Genome browser
AA seq
1532 aa
AA seq
DB search
MPVDMQSHQGLYHYESTPNQPSRGLAPSGRSPYIDVSSLRAPLHSGHPQDCRSMYNPMTP
NPRINPISGVNPMDQYMRPPLAPPLHSMMGHRSMNQSSDGGNSTPYCHNNLMSSHHGFPH
GQGLDHVGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCG
PNAASSYGHLSVGAMSPSMSYSNSMNYQSRQQGSMYGGHTPGPCHAPPPRLPPHNPRFHA
PQHGHLKTEPVLGSVMDGINIKSLEERSECDVASPSSTGTQDPLMGLLEGREDLDKEDKP
EPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQECSREQRPFKAQYM
LVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASD
RAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPG
SSLTTGGQSGELVLEKEEAGHREDCKLLAPESALKSQPSPGGQSSCSSERSPLGSANNND
SGVEMNLNAAGSLEDLTALEDGGAGGGGEAGGRGQGTAGMGGMSAQALKRLENLKIDKLK
QIRRPTPPGRCGRSSKLPALTGGPGEMMGGMCSPSPILSNRRVMELSNHELGGGPSGMAL
PISDRRGSSTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSQLGVGGGFLGPEQGGGDPLSP
ETSRRRGPCHGVGSGGGLPGLPCLTPAQQYSLKAKYAAATGGPPPTPLPSMEQGPGTPGR
RGGFLSEYQGQPLPTFLQQGGPRRHSAKMGEYGTGVIYPHQAPGNATRRASDPVRSTGDP
QALPKVQRFNSLNNVAMMGRRNALQHCGSDANIARHMYSPRPPSITENVMMEAMAMDSHG
ATTDARNHCMMLPPRERGFLGYQSHHMGGPTSLLSPSHDSLGCPEQGYQTQGQMFMQGGH
YQGTSRGPGQGQMGHGGPIHPEGMSNILLRQAEYSMSTCQLSPSGPHYPSLDQGGPDGGT
GPWVESSQVQTTHGALQTGMQYQDQGSMQGQTQGLYSSQQGLYTQGPDGGHKLTIKPEQQ
QYHPALANPDACQKQLHQHQQQRPHPGQTPMPMQPMSSQSGYPQQGQPGQGMMRTTNPSC
DFHGGGMENQNQASMQQGKKQGSFPQSGGISLGSAGLGAGGRSQTPMMQVKEMMVRNYVQ
SQQVLMWGQEQDQRGIGVDGKPLPLSDSMDMTGQQVAMMQQQQQHSPQHQQNLYPNPGSS
YPGYPTNQNLMSPPAHNRVPSSSSSIPPTEVPMMGLPGGPGSCYGQDMGAPVVPRPPQCR
KPLIRQNSVQSQEGGGYLGSPPHLSPVHSTSSPRSVVRLPPVQSHQTHQEIFSPSNNINN
NMYYSGQIHMHHPDMDKQQISHPHQDPTQTGPCLDQHQHQQHLVTHMDHQGNKSASLAYL
HESTPISNALENLDLDNAQIDFTSIIDDPDPSSFSPINPPLHGGSSQTSSRLTTPQTSIT
LPPSGLPNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagtcacatcaggggctgtatcattatgagtctacacccaaccag
ccatccagaggccttgctccttcaggaaggtctccctacattgatgtgtcgtccctgcgc
gctccgctccacagcggccatcctcaggactgcaggagcatgtataaccccatgacccct
aaccccagaatcaaccctatctccggggtcaaccccatggaccagtacatgcgaccccct
ctggctcccccactgcacagcatgatgggacaccgcagcatgaatcagtcctccgacggt
ggtaatagcaccccctactgtcacaataacctcatgtcatcccaccacggcttcccccac
ggacagggattagaccatgtgggagacggctcgcggttctcaacgcctcgctccatgctg
aagctgagtaagaagcgtgccttgtccatctctccgctgtctgacgccagcgtggaccta
cagacggtcatcaggacctcccctaactccctggtggccttcgtcaactcacgttgtgga
cccaacgcagccagctcctacggacatctgtctgtgggcgccatgagtccgtcaatgagt
tactccaactcaatgaactaccagtccagacaacagggctctatgtatggtggacacacc
cctggaccatgccacgcccctcctcctcgactacccccccacaacccccgcttccacgca
ccacaacatggacacctaaagacagagccagtgctgggtagtgtgatggatgggatcaac
attaagagtctggaggagagatctgagtgtgacgtggccagcccatcctctactggcaca
caggatcctctgatgggtctcctggaggggcgggaggatctggataaggaggataaaccg
gagccagaggccatctatgaaaccaactgccactgggagagctgcagcaaggagtttgac
acgcaggagcagctagtccaccacataaacaacgagcacatccatggagagaagaaggag
tttgtgtgccactggcaggagtgttcgagggagcaaagacctttcaaggcccagtacatg
ctggtggttcacatgcgcaggcacacaggagagaaaccgcataagtgtacttttgagggc
tgtaataaggcctactctcgcctggagaacctgaagacccacctgcggtctcatacaggg
gagaagccgtatgtctgtgaacacgagggatgcaacaaagccttctccaacgcctcagac
agagccaagcaccagaaccgcacacactccaatgagaagccgtatgtgtgtaagatccct
gggtgtacgaaacgctacacagaccccagctctctgaggaagcacgtgaagacagtccac
ggccctgaggctcacatcactaagaagcacagaggagacactgggccccggccgcctggc
tcatcactgaccactggtggacagtctggtgaactggtgctggagaaagaggaggctgga
cacagggaggactgcaaactgctggcgcctgaatctgctctgaagtctcagcccagtccg
ggtggccagtcgtcctgcagtagcgagcgttctccactggggagcgccaacaacaacgac
agtggtgtggagatgaacctgaacgcagcagggagtctggaggacctgaccgctctggag
gacggaggggcgggaggaggaggggaggcggggggaagagggcagggcacggcagggatg
gggggcatgtcggctcaggccctaaagagactagagaacctgaagatagacaagctgaaa
cagatcagacggcccactccacccggacgctgtggtaggagtagcaagctaccagcactc
acaggtggtccaggagagatgatgggagggatgtgttctccctcacccatcctctccaac
cgccgtgtcatggaactgtccaatcacgagctggggggcggaccctctggcatggccctc
cctatcagtgaccggagggggagtagcaccagcagcctgagctctgcctacacagtgagc
cgtcgttcttccatggtgtccccctacctctccagccggcgctcgagcgaggtctcccag
ttaggagtaggaggagggttcctgggtcctgagcagggaggaggtgaccccctctcccct
gagaccagccgccgaagagggccctgccatggtgttggatcgggaggagggttgccaggt
ctgccttgtctaacacccgctcagcagtacagcctgaaggctaagtatgcagcagcaact
ggcggcccaccccctaccccgctgcccagtatggaacagggaccagggacacccgggaga
cgaggagggttcctcagcgagtaccagggtcagccgctacctacgttcctgcagcagggg
ggtccgaggagacacagtgccaaaatgggggagtatggcaccggggtcatctacccccac
caagccccagggaatgccacccggcgtgccagcgaccccgtccgctccaccggcgaccca
caggcccttcccaaggtgcaacgcttcaacagcctgaacaatgtggccatgatgggccgg
aggaacgccctgcagcattgtgggtcggacgccaacatcgcccgccacatgtactcgccg
cggccacccagcatcacagagaatgtcatgatggaggccatggctatggactcccatgga
gcaaccacggatgccagaaaccactgcatgatgcttcccccaagagaaagaggcttcctg
ggctaccagtcccaccacatggggggtcccaccagcctgttatcacccagccatgacagc
ctgggttgcccagagcagggctaccagacacagggacagatgttcatgcagggtggccac
taccagggcacatccagaggaccaggtcagggccagatggggcatgggggacccattcac
ccagagggtatgtccaacatcttgctgcggcaggctgagtacagtatgagtacctgccag
cttagtccctccggaccacactaccccagcctggaccagggcggccccgatggaggtaca
gggccctgggtagagagcagccaggtccagaccactcatggagctcttcagacggggatg
cagtatcaggaccagggctctatgcagggccagacacagggtctctacagtagccagcag
ggtctgtacacccaagggcctgatggcggacacaaactgaccatcaaaccagagcagcag
cagtaccacccagccctagccaacccagatgcctgccagaagcaactccaccaacaccag
cagcagaggccccatccagggcagacacccatgcccatgcaacccatgtcctcccagagc
ggttacccccagcaggggcagcctggccagggcatgatgaggaccaccaaccccagctgt
gacttccatggaggaggcatggagaaccagaaccaggcctccatgcagcaagggaagaag
cagggttccttcccccaaagcggaggcatcagcctggggtcggctgggctgggtgctggg
ggtcgctcccagacgcccatgatgcaggtgaaggagatgatggtgaggaactatgtgcag
tcgcagcaggttctgatgtggggtcaggagcaggaccagagggggataggagtggacggg
aaacctcttcctctgtcagacagcatggacatgacaggacagcaggtggccatgatgcag
caacagcagcagcatagtccccaacaccaacagaacctctaccccaacccaggctccagc
taccctggctaccccaccaaccagaacctgatgagccccccagcacacaaccgagtcccc
agctctagctcctccatccccccgacggaggtacccatgatgggcctgcctggaggccca
gggtcctgctacggccaggacatgggggcccctgtggtcccaagacccccccagtgccgg
aagcccctcatcaggcagaatagtgtccagtcccaggaaggtggagggtacctgggcagt
cctcctcacctcagcccagtccactctacctccagccctaggagtgtggtccgtctgccc
cctgtccagagccatcagacccaccaggagatcttctccccctcaaacaacatcaacaac
aacatgtactactctggccagatccacatgcatcaccctgacatggacaagcagcagatc
agccaccctcaccaggatccaacccagaccgggccctgcctcgaccagcaccaacaccaa
cagcacctggtaacccacatggatcaccagggcaataagtctgcgtccctagcctacctt
catgagtcgacccccatctccaatgctctggagaacctagatctggacaacgcccagata
gactttacctccatcatcgacgacccagacccctcgtcattcagccccatcaaccctcct
ctccatgggggttcatcccagacctcatcccgcctcaccaccccccagacatccatcacc
ctgcccccctctgggctccctaacatggctgtaggagacatgacctccatgttgacctct
ctggccggagagaacaagtaccttaatacactgtcttag
DBGET
integrated database retrieval system