Coregonus clupeaformis (lake whitefish): 121578359
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Entry
121578359 CDS
T08357
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121578359 (smpd2b)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121578359 (smpd2b)
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Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
121578359
NCBI-ProteinID:
XP_041748627
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Position
12:complement(49605474..49612792)
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AA seq
442 aa
AA seq
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MADSNTIRLRVFSLNCWGVRYLSKHCPQRYAMIGELLSREEHDIVLLQEVWSEKDFLCLK
RKLSSTHPHSHYFKSGVIGSGLATFSRHRIHDAFLYRYSLNGYPYMAQHGDWFGGKAVGM
VILNIGRLTAHVYVTHLHAEYCREKDSYLPHRVVQAWELQQFIRHTSSGADLVILAGDLN
LHPQDLGNRLLRTYTGLRDSYTETAKFDGCEDGITLIADNPFINPKELCPFEKGIRIDYI
LYKGSGRVSIQCESLSTTKGSVPDHPFPYSDHEALSAELQLQTLTQQAGGDETRGVQDCA
AGKLAELVDIVTEARTEVKVGLYCAERMRYTAARTGVMGLALLLLELAIAAVPWLALGAD
QPFPQASFYLLGVLCFAILITTFLLYIFYTMEVMALQGAEDQMRLAVGSLQERLRGFPLA
QPLNPLRRPPDGQDPCPLEPEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcaacaccatcaggctccgagtcttctccctcaactgctggggtgtccgt
tacctcagcaagcactgtccgcagcgctacgccatgataggagagctgttgagcagagag
gagcatgatattgtcctgctgcaagaggtctggagtgaaaaagacttcctctgcttgaaa
aggaaactttcctctacccatccgcactcccattacttcaaaagtggcgtcataggcagt
ggactggccacgttctccagacatagaatccatgacgcatttctctaccgctattcatta
aacggctatccatacatggcccaacatggagactggtttggaggcaaggctgtggggatg
gtcatattgaacataggcagactgacagcacatgtctacgtcacacatctgcatgcagag
tactgcagggagaaggactcctacttacctcatagagtggtacaggcctgggagctgcag
cagtttatacgtcatacctccagtggagcagacctggtgattttggccggagatctgaac
ctgcatccccaggaccttggcaaccggttgctacggacatacactggcctccgggacagt
tacacagagactgctaagtttgatggctgtgaggacggcatcactcttatagcagataac
cctttcatcaatcccaaagagctctgccccttcgagaagggcatccgaatagactacatc
ctctacaaggggtcaggaagagtgtctatccagtgtgagtctctgtcaaccaccaagggt
tctgtccctgaccatcccttcccttactctgaccacgaggccctgagcgcagagctgcag
ctgcagaccctgacacagcaggcaggaggagacgagaccagaggtgtgcaggactgtgct
gcaggtaagctggctgagctggtggacatagtgacggaggcccgtactgaggtgaaggtg
ggcctgtactgtgctgagaggatgcgctacacggcagctcgtaccggggtgatgggcctg
gccctgctgctgttggagctggccatcgctgctgttccctggctagccctgggagctgac
cagcccttcccccaggcctccttctacctattgggcgtgctgtgctttgccatcctgatc
accaccttcctgctctacatcttctacaccatggaggtgatggctctacagggggcagag
gaccagatgaggctggctgtagggagcctccaggagaggctgaggggattccccctggcc
cagcctctgaaccccctccgtaggccaccggacggacaggatccctgccctctggagcca
gaggaatag
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