Coregonus clupeaformis (lake whitefish): 121578360
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Entry
121578360 CDS
T08357
Name
(RefSeq) transcriptional enhancer factor TEF-5-like isoform X1
KO
K09448
transcriptional enhancer factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578360
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
121578360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
121578360
NCBI-ProteinID:
XP_041748628
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All DBs
Position
12:complement(49615304..49665034)
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AA seq
447 aa
AA seq
DB search
MDGDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHIQVLARKKVREYQAGIKVSSHLQVLARRKSREIQSKLKAMNLDQASKDKALQN
MAALSSAQIVSPSLIKSQLPPLPHSPYPPQARFWPGPIPGQPGPSQELVLELNPGRTPGL
GRTSYAIKPFAQSSYPNLPGPAPPPISTYEPLAPPLPPAATAVPVWQDRTIASSKLRMLE
YSAFMEVQRDPDNYSKHLFVHIGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKG
PQNAFFLVKFWADLNSSGMQDGPGSFYGVSSQYSSSENMTITVSTKVCSFGKQVVEKVET
EYARMEGGKCVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQET
LLCIAFVFEVSTSEHGAQYHVYRLVKD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgccgagggggtgtggagcccagacatagagcagagcttccaggaggcc
ctggccatctaccccccctgtggacggaggaaaatcatcctctcagacgaaggcaagatg
tacggtcgcaatgagttgatagccaggtacatcaagctgaggacaggcaaaacccgcaca
agaaaacaggtatctagtcacatacaggtgttagcacggaagaaagttcgagaataccaa
gcgggtatcaaggtttctagccatttgcaagttctcgcccggagaaaatctcgcgagatc
cagtcaaagctgaaggccatgaatttggaccaggcgtctaaagacaaggcactccagaac
atggcagcactgtcgtctgctcagattgtgtcgccgagcctgatcaagagccagctaccc
ccgctgccccattctccttatcccccgcaagccaggttttggccaggccctatcccagga
caacctggcccctctcaggagctggttctagagctcaacccgggaaggactcctgggctt
ggccgcaccagctatgctatcaaaccttttgcacagtcctcatacccaaacctgccaggc
cctgcccccccacctatatcaacctatgaacccttggcaccccccctccccccggctgct
acggcggtgcccgtgtggcaggaccggaccatcgcctcctccaagctgcggatgctagag
tactctgccttcatggaggtgcagagggaccctgacaattacagcaaacatctgtttgtc
cacattggtcagaccaacccctcctacagcgaccctctgctggaggcagtggacatcagg
cagatctatgacaagttcccagagaagaagggcggactcaaagagctttatgagaaaggc
ccccaaaacgcctttttcctagtcaaattttgggcggatctgaacagcagtggtatgcag
gacggcccaggctccttctatggagtcagcagccagtacagcagctctgagaacatgaca
atcaccgtctccaccaaagtctgctcatttggcaaacaggtggtagagaaagtagagacg
gagtacgcccgaatggaaggagggaaatgtgtctacaggatccaccgctctcccatgtgc
gagtacatgatcaacttcattcacaagctcaaacacctgccagaaaaatacatgatgaat
agtgttctggaaaactttactatccttcaggtggtgacaaaccgtgatactcaggagacc
ttgctgtgtatagcgtttgtgttcgaggtctcgacgagtgaacacggggcacagtaccac
gtctacaggctcgtgaaagactga
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