Coregonus clupeaformis (lake whitefish): 121578388
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Entry
121578388 CDS
T08357
Name
(RefSeq) macrophage-stimulating protein receptor
KO
K05100
macrophage-stimulating 1 receptor [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121578388
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121578388
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121578388
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121578388
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
MET family
121578388
CD molecules [BR:
cclu04090
]
Proteins
121578388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
TC1
Motif
Other DBs
NCBI-GeneID:
121578388
NCBI-ProteinID:
XP_041748679
LinkDB
All DBs
Position
12:51951972..51980943
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AA seq
1375 aa
AA seq
DB search
MVPWAYFLVTCMWIQTLKASGLDTCPRTPCKEVDFTVSYSIPHFQTAKPIQNIVVNPYKP
EVYVASQNVIEAVSEGLSKVWELRTGPVGTPECQTCGLCGIEADPEDSVDTNNEVLLLDP
SSYLISLYSCGSSQHGVCYLHEINADGTPPKSECLFRKDANSPSDCPDCLASPLGTEVII
VEQGYTALFFVVATLNESVAQRYGRLSISVRRPLSTLDGFDMVMKGLTVLPELQNSYRID
YIYSFSTQDYVYFLSVQRENFLESSLYQTRLGRLPVKDTEVWMYREVVLECRFEPKRRRR
RRRTGSKVFEDVVYNRLQAAHFSRAGKELAEELGVGEKDDILYGVFVETDDSGKPYSNSA
LCAFPMANVNRAIDEGVEDCCRSSPEQLSRGLCHFQHGESCPHESSENNATCRASPTLVS
KPYYRVDLFNRYMNNVLLTSVLVTIIGNNTVAHIGTKDGRLLQLILRRSGPIIFANYSLG
EETEVSRKAAVQSDESLLFIVGNKMFSVSPKGPGCKHFLTCSTCLVAPRFIGCGWCSGVC
SRQEECPTQWKNESCPPVITEFFPKTAPPDGETELKLCGWEFQSPLRPAIISKETHLVRV
GETPCTVLSEKSNSTQLVCRIHPKIPGPYQDLNITVEVHEGKVEGRYSIQGQAQITGFTF
VEPNITEIMPDYGPQVGGTLVTLTGPHLNTGMIKTVTIGDQDCPIKSVSEGTGTMSSIVC
LSKGVAAVKKVPVRVFIDQSQVSTTKMFHYKINPVITEIQPACSFRSGSKIIIKGKNLDS
AYNTVIQYKSFKPNQKKLLQRVCNGTATPTRMECFAPVFHRNETDKGMINISMDGANLLK
QRFDYQPDASITPFEYEGNVLSLSPGQTEVSLHHNKLSMVSLCMEIIMTIGGVDCGVQVL
DNELTCRIPKDLIIPSEGLPVMVSVNGRVYKVGTVVFVNNTINTVGIMLGIFTALCVGAA
LAFIIMKHMRRKKNAKLETRLARMFVRSQISSNPDLSPTGDYRREWSNQVSQATGSGGIA
FHGLVNAATFDPSAMPLISLDTLRPELLEEVKDVLIPANTLNVHRNQIIGKGHFGTVYHG
YLTDNNNQEQLIHCAVKSLNRITDLEEVEQFLREGILMKGFHHTNVLSLLGILLPLEGLP
LVVLPYMKHGDLRHFILCERRNPTVKDLIGFGLQVAKGMEYLAQKKFVHRDLAARNCMLD
ETFTVKVADFGMARDVFGKEYYSIQDQRKAKLPVKWMAIESLQIQKFTTKSDVWSFGVLM
WELLTRGASPYPEVDPYDITHFLLKGRRLPQPQFCPDALYSIMLECWDPEPELRPDFHTL
GQEVLEILSCLEGEHYISLKVTYVNLDQPRPYPALTASADEVEASGSDSDSVVSS
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctgggcctacttcctggtgacatgcatgtggatacaaaccctcaaagcctca
ggactggacacctgtcccaggaccccttgcaaggaggtggatttcaccgttagctactcg
ataccccacttccagacagccaaacccatccagaacatagtagtcaacccgtacaagcct
gaggtttatgtggcttctcagaatgtaattgaggcagtgagtgaggggctcagtaaggta
tgggagctgaggacaggcccagtgggcactccagagtgtcagacctgtggcctgtgtggc
atcgaggctgatcctgaggactcagtggacacgaacaatgaggtcctgctcttggaccca
tcatcttatcttatctctctgtactcctgtgggagttctcagcatggggtctgttactta
catgaaattaacgctgatggtaccccacctaaatctgaatgtctcttcaggaaggatgct
aactcaccctccgactgccctgactgcctggccagccctctgggcactgaggtcatcatc
gtggagcaaggctacacagcccttttctttgtagtggctacactcaatgaaagtgtggca
cagaggtatggcagattgtccatatcggtccgccggccactgtcgaccctggacggcttt
gacatggtcatgaagggtctgaccgtgctccctgaactacagaactcctaccggatcgac
tacatctacagcttctccacacaggactatgtctacttcctgtctgtccagagggagaac
ttcctggagtcctctctgtatcagacgcgactgggccgtctgccggtgaaggacacagag
gtgtggatgtaccgtgaggtggtgctggagtgtcgcttcgagcccaaacgcaggcggagg
aggagaaggacggggagcaaggtgttcgaggacgtggtgtataacaggctgcaggcagcc
cacttcagccgggccgggaaggagctggcagaggagctgggggtgggggagaaggatgac
attctctatggggtgtttgtagagacagatgactctgggaagccctacagtaactcagcc
ctgtgtgccttccccatggccaacgtgaacagggccattgatgagggggtggaggactgc
tgtagatccagcccagagcagctctccagggggctctgccacttccagcacggcgagagc
tgccctcatgagagctcagagaacaatgccacatgcagggccagtcccaccctggtgtct
aaaccctactacagagtggacctcttcaacaggtacatgaataatgtcctgctcacctca
gtgctggttaccatcatcgggaacaacactgtggcacacattggcaccaaggacggcagg
ctgctacagctcatcctgaggaggtcaggtcctatcatctttgccaactattctctgggt
gaggaaacagaagtgtccaggaaagctgctgtgcaatctgatgagtccttgctttttatt
gttggaaataagatgttcagtgtgtctcctaaagggccaggatgtaaacacttcctgacc
tgctccacatgcctggtagcgcccaggtttatagggtgtggctggtgctcgggggtgtgc
tccaggcaggaggagtgccccacccagtggaagaatgagtcctgtcctcccgttatcaca
gagtttttcccaaagacagctccccctgatggtgagacagagcttaagctgtgtggctgg
gagttccagtctcctctacgaccagccatcatcagcaaggagacccacctggtgagggtg
ggagagaccccctgcactgtgctgtcagagaagagcaatagtacacaactggtgtgtaga
attcaccctaagattccaggtccataccaggatctcaacatcactgtggaagtgcatgag
gggaaggtggagggacgctactcaatccaaggccaggcccaaattacagggttcactttt
gtggagccaaatatcacagaaatcatgcctgactacgggcctcaggtaggggggactttg
gtcacactgacagggcctcacttgaatactgggatgattaagactgtgactataggagac
caagactgccccatcaagagtgtctctgagggtactgggaccatgtcctccatagtctgc
ctgtctaaaggtgtggcagctgtgaagaaggtgcccgtgagggttttcattgaccaatcc
caggtgtccactaccaagatgttccactacaagatcaaccctgtgatcactgagatacag
cctgcctgcagcttccgaagtggatccaagatcatcatcaaaggcaaaaatctggactct
gcgtacaacactgtgatccaatacaaatccttcaaacccaaccagaagaagcttctgcag
cgtgtctgcaacggcacagcaacccccacacgtatggagtgctttgccccagtcttccac
agaaatgagacagacaagggcatgatcaatatcagcatggatggggccaatctcctgaag
cagcgcttcgactaccaaccagacgctagcatcaccccctttgagtacgaaggcaacgtt
ctgagcctgagccctggacagactgaggtttcactgcatcacaacaagctaagcatggtg
agcctctgtatggagatcataatgaccatcggaggtgtggactgtggagtccaagtactg
gacaatgaactgacctgcaggatccccaaggatctcatcatccccagtgaaggtttgcct
gtcatggtgtctgtgaatggccgtgtctataaggtgggcacggtggtcttcgtcaacaac
accatcaacacagtgggtatcatgttgggaattttcactgcgttgtgtgttggcgctgcc
ctggccttcatcatcatgaaacatatgaggaggaagaagaacgccaaattagagactcgt
ttagcaaggatgtttgtccgcagtcagataagcagcaaccctgacctatcccccactggt
gactatagacgagaatggtccaaccaggtgagccaggcgacaggctcaggagggatagcc
ttccatggcctggtcaacgctgccacctttgacccctcagccatgcctctgatctcattg
gacacactgagacctgagctcctggaggaggtcaaagacgtcctgatcccagccaacacg
ctcaacgttcaccgcaaccagatcatcggcaaaggtcattttgggactgtgtaccacggc
tacctgacagacaacaataatcaagaacagttaattcactgtgctgttaagtcattgaac
aggatcacagacctggaggaggtggagcagtttctgagagagggcatcctgatgaagggg
ttccatcacaccaacgttctctccctgctgggtatcctactgcctctggaggggcttccc
ttggtggtgctgccctatatgaaacatggagacctgcgccacttcatactctgtgaaagg
aggaatccaacagtgaaagacctgattggctttgggctacaggttgccaaagggatggag
tacctggcccagaagaagtttgtacacagagacctggcagctcgaaactgcatgcttgat
gaaacattcacggtgaaggtggcagatttcggcatggccagggatgtgtttggtaaggag
tactacagtattcaggaccagaggaaggccaagctgccagtcaagtggatggccatagag
agccttcaaatacagaagttcaccactaagtcagacgtgtggtcatttggggtcctgatg
tgggagctgttgaccagaggagcgagcccctatcctgaagtggacccctatgacatcact
cacttcctgttgaagggacgcaggctgccccagccacagttctgccctgatgctttgtac
tctatcatgctggagtgctgggacccagagccggagctcaggcctgacttccacacgctg
ggccaggaggtgctagagatcctgtcctgcctggagggagagcattatatcagcctgaag
gtgacctacgtcaacctggaccagccacggccttaccctgcactgaccgcctctgctgat
gaggttgaagcctctggatcagactcagacagcgttgtgtccagctga
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