Coregonus clupeaformis (lake whitefish): 121578554
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Entry
121578554 CDS
T08357
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121578554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578554
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121578554
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121578554
NCBI-ProteinID:
XP_041748854
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All DBs
Position
12:12324809..12325979
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AA seq
154 aa
AA seq
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MAPTYTRDSANTMLSTKDKHKLRKPVVEKMRRDRINTCIEQLKTLLEREFHKQDPNAKLE
KADILEMTVGFLKQQLQPQSPVRQRAHSEGHSQCWRETLHFLSSSSMKDMTLLNLQRAGQ
DICPSSPLSSQHQNHSQGSVKQATSGHEPVWRPW
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggctcctacctacaccagagactctgccaacaccatgctctctactaaagacaaacat
aaactaaggaaaccagttgtggagaagatgcgtagagaccgcatcaacacctgcatagag
cagctcaagaccctgctggagagggagttccacaaacaggaccccaatgccaagctggag
aaggctgacatcctggagatgacggtggggttcctgaagcagcaactgcagcctcagagc
ccagtccgtcagagggctcacagtgagggccactcccagtgttggagggagacactacac
ttcctgtcttccagctccatgaaggacatgacgctcctgaacctccagagagctggccag
gacatctgtccctcctctccactctcctcccaacaccaaaaccacagccaaggttcagtg
aagcaggccaccagtggccacgaaccagtctggaggccttggtag
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