Coregonus clupeaformis (lake whitefish): 121578612
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Entry
121578612 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121578612
04082 Neuroactive ligand signaling
121578612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121578612
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121578612
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
YrhC
DUF2417
Motif
Other DBs
NCBI-GeneID:
121578612
NCBI-ProteinID:
XP_041748909
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Position
12:complement(576089..584906)
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AA seq
551 aa
AA seq
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MMITNVWVKQEWNDYKLCWNPKEYENVTSMHIPSQLIWRPDIVLYNNADGDFSVTHLTKA
HLFHDGRIKWVPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDRTKIDLISMAGNVDQM
DYWESGEWVLVDAVGNYNIKKYECCHEVYSDITYSFIIRRLPLFYTINLIIPCLLISCLT
VLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVISLIGEYLLFTMIFVTLSI
SITIFVLNVHHRSQRTDTMPRWVRRVFLDVVPGFLFIRRPAVVKDNSKKLAEAMPKRATL
LGGLEASFPPTSPLEVQEILARSPSLSLGRPMEGSLPPKLPQQQQQPLDRSPSQYSILLE
EPTASSQPGCSPSPPFLHPLYLPRDKHHAAWPKMRSLSLQYGLGERERPQTSVRCRSRSI
QYCSLHEEASSMGNGMQRPLSQHPSLMEERKQSCSAVCKYHAGLSEAAKAMTKDQRLLAL
SPSMKMAMEGVQYIADHLRSEDIDFSVKQEWKYVAMVIDRIFLWLFILVCILGTLGLFLP
PWLAGMIDLSV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcactaatgtctgggtgaaacaagagtggaatgactacaagctctgctggaat
cctaaggaatacgagaatgtcacctccatgcacatcccatcccagctaatctggagacca
gatatagttctttacaacaatgcagatggtgatttctccgtgacccacctgaccaaggcc
cacctgttccacgatgggcgcatcaaatgggttcccccagccatctacaagtcctcctgc
agcatcgacgtcaccttcttccctttcgaccagcagaactgcaccatgaagtttggctcg
tggacctacgaccgcaccaagatcgacctaatcagcatggcgggcaacgtggaccagatg
gactactgggaaagcggcgagtgggtgctggtggacgccgtgggcaactacaacatcaag
aagtacgagtgctgccacgaggtctactctgacatcacctattccttcatcatccggagg
ctacctctgttctacactattaatctgataataccctgtctgctcatctcctgcctgact
gtcctggtgttctatctgccctcccagtgtggagagaagatcaccctgtgtatctctgtg
ttgctgtctctcaccgtcttcctcttgcttattaccgagatcatcccgtctacctcgctg
gtcatctcgctcatcggggagtacctcctcttcaccatgatcttcgtcaccctgtctatc
agcatcaccatcttcgtgctcaacgtgcaccaccgctcgcagcgcacggacaccatgccc
cgctgggtgcgccgtgtcttcctggatgtcgtccctggcttcctgttcatccggcggccc
gccgtggtcaaggacaacagcaagaagctggcggaggccatgccaaagagggccacgcta
ttgggtgggctggaggccagctttcctcccacttcccccctggaggtccaggagatcctg
gcccgctccccttctctttccctgggccgacccatggagggttccctgccccccaagctt
ccccagcaacagcagcagcccctggacaggtcccccagccagtactccatcctcctggag
gagccgaccgcctcgtcgcagccaggctgctctccctctcccccgttcctccaccctctc
tacctgcccagggacaagcaccacgcggcctggcccaagatgcgctccctcagcttacag
tacggcctgggggagagggagcgcccccagaccagcgtccgctgtcgctcgcgcagcatc
cagtactgctccctgcatgaggaggcctcctccatgggtaacggcatgcagcggcctctc
tctcagcacccgtccctgatggaggagaggaagcagagctgctcagctgtctgcaagtat
cacgcaggcctgtccgaggcagccaaagccatgaccaaggaccagcggctcctcgcctta
tccccgtccatgaagatggccatggaaggtgtgcagtacatcgcagatcacctccgttcg
gaggatatcgacttctctgtgaagcaggagtggaagtacgtggctatggtcatagaccgg
atctttctgtggctgttcatcttggtgtgtatcctggggaccctgggactcttcctccct
ccctggctggctggaatgatagacctatctgtctga
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