Coregonus clupeaformis (lake whitefish): 121578655
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Entry
121578655 CDS
T08357
Symbol
tgfa
Name
(RefSeq) protransforming growth factor alpha
KO
K08774
transforming growth factor, alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04012
ErbB signaling pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121578655 (tgfa)
04012 ErbB signaling pathway
121578655 (tgfa)
04020 Calcium signaling pathway
121578655 (tgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121578655 (tgfa)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121578655 (tgfa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSP160
EGF_Teneurin
EGF
Motif
Other DBs
NCBI-GeneID:
121578655
NCBI-ProteinID:
XP_041748962
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Position
12:complement(29780278..29790790)
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AA seq
191 aa
AA seq
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MMNRAFWDAIFLITGSLFTYGTGQDNSTIATNSTMTTTPPVTTTTTTVNVTTSSTTTTTT
IPVKKFVAAAVRSHFDDCPDSHSHFCFHGTCRFLILEETPACVCHQGFVGMRCEHADLLA
VVATNHRQQTVATVLVLCVIGCVLTMLLCTLLHCWWRRDGFGRRHRLHCAPEKQGSMLKV
RGSCCHSESVV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgggctttctgggatgcgatctttctcattactggttccctctttacatat
ggaacaggccaggataattctactattgctactaattctacaatgaccaccacccctcct
gtaactaccaccactaccactgtaaacgttactacctcttctaccaccaccacaaccacc
attccagttaaaaagtttgttgcagcagctgttcggtcacacttcgatgactgtcctgac
tcccacagccacttctgtttccatggcacctgtcgtttcttaattctggaggagacgcct
gcatgtgtgtgtcaccaaggcttcgtagggatgcgatgtgagcatgccgacctgctagcc
gtggtggccaccaatcacaggcaacagacagttgccacggtgctagttctgtgtgtgatt
ggctgcgtcttgacgatgctgctctgcacccttttacattgctggtggaggcgggacggt
tttgggcggaggcacagactccactgtgccccagagaaacaaggcagtatgctgaaggtc
cgagggtcctgctgtcactctgaaagtgtggtgtaa
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