Coregonus clupeaformis (lake whitefish): 121578691
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Entry
121578691 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121578691
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121578691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121578691
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121578691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
121578691
NCBI-ProteinID:
XP_045075906
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MPRLYVGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVVIEHARGLRRERDVYRTGGGGRSSGYSSRSRTGWDKYGPPVRTEYRLIVENLSSR
CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSRSDMRRALDKLDGTDINGRKIRLVK
DKPRRRRSYSGSCSRSRSRRRSCSRSSGSHSRSRSRSDHKSCSRSGKKSRSKSPTRSKSR
KSRSKSRSRSGAHKSRSCSTSHKSRSQSHTRKSRSKSQNRSPPSTENGNGQRSKSASKSP
CPQEDLHQSKSPAKRSASGSPSRSKSRSCSRSRSTSQD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctctatgtcggcagattgagttatcatgttcgtgagaaagacatccaaagg
tttttcagtggttacgggaagctactggaggttgatctgaagaatgggtacggcttcgtg
gagttcgaggacacgcgtgacgccgacgatgcagtttatgagctgaacgggaaagagctt
tgcggtgaacgagtcgtcattgagcacgctcgtggcctgcggagggaacgtgatgtatac
cgtactggcggaggtggacgcagtagtggttacagcagccgaagccgcactggctgggac
aagtacgggccacctgtacgcacagagtaccgccttattgtggagaacctctctagtcgc
tgcagctggcaggacctaaaggacttcatgcgccaggctggtgaggtgacctatgccgac
gcccataaggagcggaccaacgagggggtgattgagttccgatcccgctcggacatgagg
agggccctggacaagctggacggcactgacatcaatgggaggaagatccgcctggtgaag
gacaagcctcgccgccgacgctcctactctggcagctgctctaggtctcgcagcagacgt
cgctcttgcagcagaagttctggaagccactccaggtcacgctcacgatctgaccacaaa
tcctgttctagatctgggaagaagtcccgctctaagtccccgacccgctccaagtctcgc
aagtcccgttccaagtcccgttctcgctccggcgctcacaagtctcgcagctgctcgacg
agccacaaatctcgctctcagtcccacacacgcaagtctcgctctaaatcccagaatcgt
tccccaccctccacagagaatggaaacggacagcggtccaagtctgcctccaagtctccc
tgcccacaagaagaccttcaccaatccaagtccccagccaagcgctcagcctctggatcc
ccctcacgctctaaatcccgctcctgttcccgatccaggtcgacttcccaagattaa
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