Coregonus clupeaformis (lake whitefish): 121578756
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Entry
121578756 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121578756
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121578756
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
V-set
fn3
Ig_2
LRRCT
Pur_ac_phosph_N
LRR_EndoS
LRRNT
Sp38
Motif
Other DBs
NCBI-GeneID:
121578756
NCBI-ProteinID:
XP_045079993
LinkDB
All DBs
Position
12:35146770..35167148
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AA seq
715 aa
AA seq
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MALSPLPWPPLAWLCVGLLLPLLPLVRGGECPRLCVCEVRPWFTPQSTYREAATVDCNDL
RLTRIPSNLSFDTQVLLLQSNSIAHTSGELEALFNLTELDLSQNNFSSVEAVGLANINLL
TTLHLEENLISQLPDHCLQDLSNLQELYINHNQISSIAPGAFSGLRSLLRLHLNSNRLRV
IDSRWFEATPNLEILMIGDNPVIGILDMNFKPLGSLRSLVLAGMDLTDIPGNALMGLDNL
ESLSFYDNKLVRVPQLALQKVANLKFLDLNKNPVHKIQEGDFRNMLHLKELGINNMAELV
SIDRYALDNLPELTKLEGTNNPKLSYIHRTAFRDVSSLESLMLNNNALNAIYQCTVEALP
NLREISLHSNPLRCDCVIQWMSSNRTSVRFMEPLAMLCSSPPELRGQRVREVRLLDSPEQ
CLPLISHNTFPSHLSLELGMSVSLDCRAMAEPEPEIYWVSPMGSKITVDTVSELYHLSSE
GTLRLSHVQVEDSGRYTCVAQNTEGADTRVTTIRVNGTLLDSVEVMKIYVKQTESHSILV
SWKINSNVMTSNLKWASATMKIDNPHITYTARVPVDVQEYNLTHLQPGTEYEVCLTVSNI
HLQTHKSCVNVTTRSITFTLDVSDQRPSAALLVVMATMLAFLSLATMGVYVARRWKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWEADSEKDKEGGAESKPSPVDTTRSYYMW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctctaagccccctcccctggcccccgctggcatggctgtgtgtagggctgctgttg
cccctgctgcccctggtgcggggcggggagtgcccacggctgtgcgtgtgtgaggtgcga
ccctggttcacccctcagtccacctacagggaggcagccacagtggactgcaatgacctg
cggctgacacgcatcccctccaacctgtcctttgacacccaggtgttgctgctccagagc
aactccatcgcccacaccagtggggagctagaagccctgttcaacctgacggagctggac
ctgtcccagaacaacttcagcagtgtggaggccgtgggccttgccaacattaacctgctc
accaccctgcacctggaggagaacctgatcagccagctgcccgaccactgcctacaggac
ctcagcaacctgcaggagctctacatcaaccacaaccagatcagctccatcgccccagga
gccttctctggcctgcgcagcctgctgcgcctccacctcaactccaacaggctccgggtc
atcgacagccgctggttcgaggccacacccaacctggagatcctgatgatcggcgataac
cccgtcattggtatcttggacatgaacttcaagcccctggggagcctgaggagcctggtt
ctggctggcatggacctcaccgacattcccgggaatgctctgatgggtctggataatctg
gagagcctgtccttctacgacaacaagctggtccgagtgccccagctggccctgcagaaa
gtggccaacctgaagttcctggacctgaacaagaacccggtgcacaagatccaggagggg
gacttcaggaacatgctgcatctgaaggagcttggcatcaacaacatggctgagctggtg
tccatcgaccgctacgccctggacaacctgcctgagctgaccaagctggagggcaccaac
aaccccaagctgtcctatatccaccggacggccttcagggacgtgtcctccttggagagc
ctgatgctcaacaacaacgccctcaacgccatctaccagtgcaccgtggaggcgctgccc
aacctgcgcgagatcagcctgcacagtaacccgctgcgctgcgactgcgtcatccagtgg
atgagctctaacaggaccagtgtgcgcttcatggagcccctggccatgctgtgtagctca
ccacccgagctccggggccagcgggtcagagaggtgaggctgctggactcaccagagcag
tgcctgcccctcatctcccacaacaccttccccagccacctgagcctagagctgggcatg
agtgtcagcctggactgccgggccatggctgagcccgagccagaaatctactgggtgtct
cctatggggagcaagatcacagtggacacggtgtcggagctgtaccacctgagcagtgag
ggcaccctgcggctgtcccacgtccaggtggaggactcgggccgctacacctgcgtggcc
cagaacacagagggggctgacacacgcgtcaccaccatccgcgtcaatggcaccctgctg
gacagcgtcgaggtgatgaagatctacgtcaagcagaccgagtcccactccatcctggtc
tcctggaagatcaactccaacgtcatgacctccaaccttaagtgggcctcggccaccatg
aagatcgacaatccccacatcacctacactgcacgcgtgcctgtcgacgtacaagaatac
aacctgacccacctgcagccgggcactgagtatgaggtgtgcctcaccgtctccaacatc
cacctacagacccacaagtcgtgtgttaacgtgaccacgcgcagcatcaccttcaccctg
gacgtgtcggaccagaggcccagcgccgccctgctagtcgtcatggccaccatgctggcc
tttctcagcctggccaccatgggggtgtacgtggcccgccgctggaagaggaagaactat
caccactccctgaagaagtacatgcagaagacctcatccatccccctcaatgagctctac
ccgcccctcattaacctgtgggaggcggacagtgagaaggacaaggagggcggggcagag
agcaagccctcccccgtggacaccacacgcagctactacatgtggtga
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