KEGG   Coregonus clupeaformis (lake whitefish): 121578905
Entry
121578905         CDS       T08357                                 
Name
(RefSeq) period circadian protein homolog 1-like
  KO
K21944  period circadian protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121578905
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121578905
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 121578905
NCBI-ProteinID: XP_045080357
LinkDB
Position
13:complement(40657551..40666614)
AA seq 1517 aa
MSDENAYTTSGKDTSGVSLAEDAVAGQEAGSQSPESGLSQTGSSNGNGKRTRSGGKSSNS
DDTDAHSSGNDSAEREVEGHMGHEASTCSSSHNGKDSAMETTESKSSNSHSPSPPNSSMV
YSLLSGSSEQDHPSTSGCSSDQPSRLQTQRELLKALKELKIRMPADHRTKGRSSTLASLQ
YALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSVGVSF
LSGKVVYISPQASPMLRTKPERLQGALFSELLAPQDVSTFYSSTAPCRLPPWASCTGSMT
SPVDCTQEKSMFCRISGGRDSKGEVRYYPFRMTPYQLTLRDSDMPQPCCLLIAEKVHSGY
EAPRIPADKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDRPVMVAI
HKKILQSAGKPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNE
DVFTPTMEVEARPMSPEIPRLSEQIHRVLVQPVHSGGSQGYCSSHGSQPQRPSPGSSSGS
NSPSTKELILKTIQRPQQMTFQQICKDVHMVKTNGQQVFTKSRNRPALRKHASTGALVVP
ENLNKDLGPIGALGPIKTLASVQPRKDPSADYSYQQINCLDSIVRYLESCNVPNTVKRKC
GSSSCTTSSTSDDDKQRELPGTAKDLEGPQGNEGSKGGPHMSPLALHCKAESVVSLTSQC
SFSSTIVHVGDKKPPESDIVMMEETPATPTLTVTSPAPATNNTITTAVTPRPSALPSPAP
SSPAQPERDGRRSAGCSGRLGLTKEVLSAHTQQEEQAFLSRFRDLGQLRVLDPGPPSLRG
HTTTPKGVRSSQDYPAGGNGRRRGRGGKRLKHQQEGSQHGGRPQSGSGMNGSSRREGQGR
QGLMFPMGQPLMMQGPLTSSSSWPTSVASQVSLPPAVAQYPPGVLPFFPLYPNVQQPLLA
HTGVNPNAMQMGYPSPQPGLQYPLHANQMPMTMPPPMMVVLPNYIIPHLNGGVTQLNTAI
PHLNPGIHGMAQLNQALPQFNQAIPLPQLNPGLAQFNPAMTQMNGMPHVSPTLAQLNLSQ
VNPLSMIPQHFYNPNPTLPFPNPIPISGLPGFALPEMDPTFVHRGNSRSCTPQSTCQVPL
EGTDSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTLPPPGSVSQVGGQGSVNRSSM
KGDAKEDDNADADDQDAMSTSSDLLDLLLQEDACSGNGSAASGSGSSGSGSGSSGSGSNG
CSTSGSGTRSSNTSKYFGSIDSSENDHSHKQAPGGAKEAQLMKYVLQDPIWLLMANTDDK
VMMTYQMPTRDRETVLREDRMILRAVQKQQPCFTEEQKRELIQVQPWMGTGRLPQAINTP
TCTGCGSPPATSVPRPFDVELQDMDLTGDLQLQEEATAHTETPVTMATDTHDTSIPPPQA
PQTETKGGEGERRVEQEGESKDTRVKELEVTSSSGTEKGDSGCKRQPRTSIWPMTLKHNA
LGQTGAKLTVNVLCLNK
NT seq 4554 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaaggacactagtggagtaagtttagca
gaagatgcggtggcgggacaagaggcgggctcccagtcccctgagtctggactgagtcaa
actggcagctccaatggaaatggaaagagaactcggtctgggggcaagtcctcaaactct
gatgacactgatgcccactcgagcgggaacgactcagccgagagagaagtggaaggacac
atggggcacgaggcatcaacctgcagcagctcccataatgggaaggactctgccatggag
acaacagagagcaaaagctccaactcccacagcccttcccctcccaacagctcgatggtc
tatagcctgctgagtggcagctcggaacaggaccacccgtccaccagcggctgcagcagt
gaccagccgtcccggctgcagacccagagagagctgctcaaggccctgaaggagctgaag
atccgcatgcctgcagaccaccggacgaaaggccgctccagcactctggcctccctgcag
tacgcgctcaactgtgtcaaacaagtcagagcgaatcaggagtattaccaccagtggagt
gtggaggagagccacggttgcagtctagacctctcagccttcactacagaggaactggac
aacatcacttctgaatacacactccaaaacacggacacattctctgtgggagtgtcgttc
ctctctgggaaggtggtgtacatctccccccaggcctctcccatgctgcgcactaagcct
gagcgactacagggggcgctcttctctgagctgctggccccacaggacgtcagcactttc
tacagcagcacggctccatgccgcctgcccccctgggcctcctgtactggctccatgacc
tcccctgtggactgcacccaggagaaatccatgttctgccgtatcagtggtgggagggac
agcaagggggaggtgcggtactaccccttccgtatgaccccctaccagctaactctgcgg
gactctgatatgccacagccctgctgcctgctcatcgctgagaaggtgcactcaggatac
gaagctccccgtatcccagctgacaagaggattttcaccactagccacacccctagctgt
ctctttcaggaagtcgatgaaagggctgtgccgttgctaggctacctgccccaggacctg
gttgggacccctgtcctcatgtacctccaccctgatgaccggcctgtcatggtggccatc
cacaagaagattctccagtcagcggggaagccctttgaacactcgccccttcggatgtgt
gccaggaacggggagtatctcaccatagataccagctggtcctctttcgttaacccctgg
agccgcaaagtggccttcatcgttggtcgacacaaagtcagaacgagtcccctgaacgag
gatgtgttcacgcctactatggaggtggaggcgcggcccatgtcaccagagatccccagg
ctcagtgagcagatccaccgtgtgctggtgcagcccgtccacagtggtggctcccagggc
tactgcagctcccacggatcccagccacagaggcccagcccgggctcctcgtcaggcagc
aacagcccctccaccaaggagctcatcctgaagaccatccagagaccacagcagatgaca
ttccagcagatctgtaaggacgtccacatggtgaagaccaatggtcagcaggtcttcacc
aagtcccgcaaccgcccagcactccgcaaacatgccagcactggagccctggtggtgcca
gagaatttgaacaaggacttgggacctattggagctctggggccaattaaaaccctggcc
tcagtgcagccaaggaaagacccatcagccgactattcctaccagcagatcaactgtctg
gacagcatcgtacgctacctggagagctgcaacgtccccaacacagtgaagaggaaatgt
ggctcctcctcctgcaccacatcatcaacgtcagatgatgacaagcagagggagttgcct
ggaactgctaaagatctcgaagggccccagggtaatgaagggtctaaaggggggccacat
atgagtcccctggcgctgcactgcaaggctgagagtgtggtctctctcacgtcccaatgc
agcttcagcagcactattgtccacgtaggggacaagaagcccccagagtcagatattgta
atgatggaggagacaccagccacccccactctcaccgtcacctctccagccccagccact
aacaacaccatcacgacggcagtgaccccccgaccatcggccctgcccagcccggcacca
tccagccctgcccagcccgagagggacggccgcaggtcagctggatgctcaggccgccta
ggtctgaccaaggaggtgctgtctgcccacacccagcaggaggaacaggcgttcctgagc
cgcttcagagacctgggacagctacgtgtgctggaccccggccctccttctctgagagga
cacaccaccacacccaaaggagtgcgcagttcgcaggactacccagcaggcggtaatgga
cggaggaggggccgcgggggcaagaggctgaagcaccagcaggagggctcccagcatggg
ggccgcccccagtctggctcagggatgaacggtagttccagaagggaagggcaggggcgt
caaggcctcatgttccccatgggtcaacccctgatgatgcagggacccctgacctcatcc
tcctcctggcccacctctgtggcctctcaggtcagcctccctcctgccgtggcccagtac
cctccaggagtcctgccctttttccccctctaccccaacgtgcaacaaccactcctggcc
cacaccggagtgaaccccaatgccatgcagatgggctaccccagcccccagccaggctta
cagtaccccctgcatgccaaccagatgcccatgacgatgcctcccccaatgatggttgtt
ctgcccaactacataatccctcacctcaacggaggtgtaacacagctcaatacagccata
ccgcaccttaaccccggtatccatggtatggcacaacttaaccaggcactaccgcagttc
aaccaggctatcccactaccacaactcaatcctggattggctcagttcaaccccgctatg
acgcagatgaatggcatgcctcatgtgagtcccaccctagctcaactcaacctgtcacag
gtcaatcctttgtcgatgatcccccaacacttttacaatcccaacccaacattacctttc
ccaaatcccattccgatttccggccttcctggctttgccttacccgagatggatcccacc
ttcgtccatcgcggcaactcccgctcctgcacccctcagtccacgtgccaagtgcccctg
gaggggactgactcgcccctcttccagtcccgatgctcctcccccctcaacctactgcaa
ctggaggagttgccaggcaaccgtcaggagggcatgtcgacaggggcgcagcagaccctg
cccccacctggctcggtgtctcaggtcggaggtcaaggctctgttaaccgcagcagcatg
aagggtgacgccaaagaggacgataacgctgatgctgatgaccaggatgcaatgtccacc
tccagtgacctgctggacctgctgctgcaggaggacgcctgctcaggcaacggctcggcc
gcctctggctccgggtcctcaggctctggctccgggtcctcaggctctggctctaatgga
tgcagcacctcagggagtggcacaagaagcagcaacactagcaaatactttggcagcatt
gactcgtcagagaacgaccattcccataagcaggcaccagggggggccaaagaggcccag
ctcatgaaatatgtccttcaggaccctatctggctccttatggcgaacacagatgacaag
gttatgatgacgtaccaaatgcccaccagggacagggagactgttctaagggaggatcgt
atgatactgagggcggtgcagaaacagcagccgtgcttcactgaggagcagaagagagag
ctgatccaggtccagccctggatgggcaccggacgcctgccacaggccatcaacacccct
acttgtaccgggtgtggttctcctcccgctacctccgtccctaggccttttgatgtggag
ctgcaggacatggatttgacaggggacctccagctacaggaagaggccactgcacacaca
gagacaccggttaccatggcaacagacacacatgacacctccatcccaccaccacaagcc
ccccagacagagactaaggggggcgagggtgagaggcgagtggagcaggaaggagaaagt
aaggacaccagagtgaaagagttggaggtgacgtcatcatccggaacagagaaaggggac
tctggctgtaaacggcaaccgaggacttctatatggccaatgactctaaaacacaatgca
ttgggacaaacgggggccaagctcactgttaatgtgttgtgtttgaacaaataa

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