KEGG   Coregonus clupeaformis (lake whitefish): 121578935
Entry
121578935         CDS       T08357                                 
Name
(RefSeq) pinopsin-like
  KO
K04256  c-opsin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121578935
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:cclu04030]
    121578935
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121578935
G protein-coupled receptors [BR:cclu04030]
 Rhodopsin family
  Vision
   Opsin
    121578935
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srx 7TM_GPCR_Srsx MP_p6 7TM_GPCR_Srw
Other DBs
NCBI-GeneID: 121578935
NCBI-ProteinID: XP_041749165
LinkDB
Position
13:complement(46432796..46438610)
AA seq 396 aa
MVVESGNFNFSTEDSSRTNLSANDSVRDTLVSKEQSELSRTGHTVVAVFLGVIFLLGFLS
NLFVLLVFARFQVLRTPINLILINISVSDMLVCIFGTPFSFAASLYGRWLIGAHGCKWYG
FANSLFGIVSLVSLAILSYERYSTILCYTKADPSDYKKAWLAIAGAWLYSLVWTVPPFFG
WGSYGPEGPGTMCSVQWHQRSSRNISYVTCLFIFCLLLPLLLMIFCYGKILFAIHGVAKI
NQSSAQRRETHVLVMVVSMVSCYLLCWMPYGVVALLATFGQVGLVSPTTSIVPSILAKSS
TFLNPIIYGLLNNQFYRCFLAFMSCGSEPAGSHTLHTLPSSRVFGPNGNSPARKEPVTFP
GTRKPLDGSGTSSKTQTCGQQREKPDLVLLVVHYTP
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggttgttgagagcggcaacttcaatttcagcacggaggacagctccaggacgaacctc
agcgctaatgacagtgtccgcgacactctcgtgtccaaagagcagtccgaactcagtagg
acagggcacacagtggtagccgtgtttctcggtgtcattttcctgttaggattcctcagc
aatttattcgtccttctcgtctttgcgcggtttcaggtgctgaggacacccatcaacctc
atcctgatcaacatcagcgtgagcgacatgctggtgtgtatcttcggaactccctttagt
tttgccgcgagcctctatggtagatggctcattggagcccacgggtgcaagtggtacggt
ttcgccaactcgctttttggcattgtttctctagtatccctggcaattctctcctacgag
cgctactccacgatattgtgttacacaaaggctgacccatctgactacaagaaggcctgg
cttgccatcgcaggtgcctggctctactccttggtgtggacggtgccacctttctttggc
tggggcagctacggtcccgagggcccaggcaccatgtgctcagtgcagtggcaccagcgc
tcttctaggaacatctcctatgtcacctgcctcttcatcttctgcctcctacttcccctg
ctgctcatgatcttctgctatggaaagatcctctttgccatccatggggtagccaaaatc
aaccagtcgtctgcacagcggcgggagacccatgtgttggtgatggttgtctccatggtg
tcctgctacctgctctgctggatgccctacggggtggtggctctgctggccactttcgga
caggttggcctggtcagccccaccacaagcatcgtcccctccatcctcgccaaaagtagc
acttttctcaaccctatcatatatgggcttttaaacaaccagttctacaggtgcttcctg
gccttcatgagctgtgggtcagaaccagcaggcagccacaccctccacaccctgcccagc
agccgagtgtttggccctaatggcaactccccagcccgaaaggagcctgtcacattccct
ggtacacgcaagcctctggacggcagtgggacctcctctaagactcagacatgtggccag
cagagagagaaacctgacctggtcctcctggttgtgcactacaccccttga

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