Coregonus clupeaformis (lake whitefish): 121578938
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Entry
121578938 CDS
T08357
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121578938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121578938
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121578938
Endosome - Golgi transport
Arf GTPase associated proteins
121578938
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121578938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
Motif
Other DBs
NCBI-GeneID:
121578938
NCBI-ProteinID:
XP_041749167
LinkDB
All DBs
Position
13:47272689..47278528
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AA seq
759 aa
AA seq
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MPHTIPTSSVLQDKFTEIVFHVSSITDVRKQDKGRFSIYFSKKHFEFMAHNKAVQEGWVT
SLLASRGQNPPVHPEQHGALTMKDPRSRVYAAICGHNLWIYNNKEDFQLGVGMTYVSMNV
ASVKQTGRHNFSLITPYKTFNFSTDSLKELGVWLGSLTQVIRSALSCSEVAERLWASPWN
KVCADCGCANPEWASVNLLVVICEACAGQHRSLGIHVSKVRSLKLDSKVWTEPLILLFVH
YGNIAANDVWGHNVPGAEQILPDSSVDQRGDFIRAKYTKGRYRRTHPLASSQRLLNKRLC
EIVCGPNVPETMSLLCSGARVLCHSGDPQCPSPISLAEQAGQAMQTELLRHNEYTEAPPY
AHQKPSRDPASSVPSSAAGEELHGKLEEDRFLFSQENDSAACDVLDLREVISIFDRSNGP
THAFELVTLTDQLLCSADTEEGLLTHLLHILKVVLPGPIDEEELDKGFAVSRVSLREGGG
LQHTEVWAVLRGGQVLIYPTDQQRHRERLTLNRESQYKIDSSVNTIELVTGERTMSMQFE
RDHSCQSWHTLLKWAVTTKRKPRQLPPTAIGNVPPAIERCISHITKYGLKVDGLYRRCGL
ATKISYLVEALSSSPKTTPLETDEEGLLDAAGALKQYIRQQVVLIPETHRKLWVEAAAHT
EETFRLAAYRRLLKKLPPDNRITLNALCGHFYIVQLYSAENRMTAQNLALVFVPTLFQEL
AMNTDLVHLTRELIIHHTLLFLGKEEESDMESEELITKL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatactattcccacatcttctgtgctgcaggacaagttcaccgaaatagtgttc
cacgtgtcaagcatcaccgacgtccgtaagcaggacaaaggacgcttctccatttacttc
agcaagaagcactttgagttcatggcacacaacaaagcggtgcaggagggctgggtgact
tcccttctggcttctcgtggacagaaccccccagtccatccggagcagcatggagccctg
accatgaaggaccctcgtagcagagtgtacgctgccatctgtggacacaacctatggatc
tacaacaataaagaggacttccagttgggggttgggatgacctatgtgtccatgaacgtg
gcttcagtgaagcagacgggccgtcataacttcagcctcatcacaccgtataaaaccttt
aatttctccacagactcattgaaggagctgggcgtgtggctggggagcctgacccaggtg
atccgcagtgccctgtcatgcagcgaggtggccgagcgactctgggccagcccatggaac
aaagtgtgtgccgactgtggctgtgccaaccctgagtgggcctccgtcaacctgctggtg
gtcatctgtgaggcctgcgcaggtcagcatcggtctttgggcatccatgtgtccaaagtg
agaagcctgaagttggacagtaaagtgtggaccgaacctctgattctgctctttgtccat
tatggaaacatagcagccaatgatgtgtggggtcacaacgtgccgggtgcagagcagatc
ctgccggactcctctgtggatcagagaggggacttcatcagggccaagtacaccaagggc
cgatacagacggacccatccactagcctccagccagagactgctcaacaagaggctgtgt
gagatagtgtgtggccctaatgtcccagagaccatgtctctgctgtgctcgggggcacgg
gtcctgtgccactcaggggaccctcagtgcccctcacccatttcactggcagagcaggct
ggacaggccatgcagactgagctcctcagacacaacgagtacacagaggcccctccttat
gctcatcagaagcccagcagagaccctgcttcctctgtcccctcttctgctgcaggagag
gagctccatgggaagttggaggaggaccgcttcctgttctctcaggagaatgactctgct
gcctgtgatgttctggacctgagggaggtcatctccatctttgaccgctccaacggacca
actcatgcatttgagctggtgactctgacggaccagttgctgtgcagtgctgatacagaa
gagggtctgctcacacaccttctccatattctcaaggtggtgttgcccgggcccatagat
gaggaggagctggacaaggggtttgctgtgtcccgggtgtctctgagggagggaggaggc
ctgcagcacaccgaggtctgggcagtgctccgtggaggtcaggtcctcatctatcctact
gaccagcagcgccacagagaaaggctaacactcaaccgcgagtctcaatacaagatagat
tcctctgtgaacaccatagagctggtcactggagagagaaccatgtccatgcagtttgaa
cgagaccacagctgtcagtcctggcacaccctactgaaatgggcagtgaccacaaagagg
aagccgcgccagctgccccccaccgccattggcaatgtgccccctgccatcgagaggtgt
atctcacacatcacaaaatatggtttaaaggtggatgggctgtaccggcgctgtggcttg
gccactaagatcagttatctggtggaggccctcagcagttcacctaaaactacccctctg
gagacagacgaagagggtctcctggacgctgcaggggccctgaagcagtatatccgccag
caggtggtgctcatcccagagacacacaggaaactatgggtagaggctgcagctcacaca
gaagagaccttcagactggctgcctaccgcagactactgaagaagctgccccctgacaac
agaatcacactcaacgccctctgtggacacttctacatagttcagctgtatagtgcagag
aaccgtatgacagctcagaacctggcgctggtgtttgtccccacactattccaggagctg
gccatgaacactgacctggtgcacctcactagagagctcattatccaccacacactcctc
ttcctgggtaaagaagaggagtctgacatggagagtgaagaactgataacaaaattatag
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