Coregonus clupeaformis (lake whitefish): 121578964
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Entry
121578964 CDS
T08357
Symbol
hmgxb3
Name
(RefSeq) HMG domain-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Motif
Pfam:
CxC4
HMG_box_2
HMG_box
RNA_POL_M_15KD
Motif
Other DBs
NCBI-GeneID:
121578964
NCBI-ProteinID:
XP_045081548
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Position
2:22849461..22865715
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AA seq
1348 aa
AA seq
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METMEVYEETDRRMTEEVESCYTLMEVTSPKKRKKNKAQQGEIMEKPKKPRSAYLLYYFD
VHQTMQQEFPNLPQSEINKRISVSWKRLNVADKGYYLEKAKLEKEGTDMSSMGPCQELPG
FRRILPRSNYVLLPKGTMTDNRTGSQLEVCMEGLDSPVGEGVMPSLSLGTPQYPPLVLGC
EVELSEQCIAIDGLTDEEAVTLTHSGALQGVLSSSYHSSSSASHDSHNAPHLAAAGLLLK
EEEPRMVGGGYSVIGMATDGGRVGGTVVQHVKTELVTIIPNQDLMEHRTLPGASSVASVV
MVPVGARVVRDTKPSYKLSKKYTRRGRGSCQTAGCSFVYVTRHKPPFCPDCGNHLGGKWV
PAAKKSSVKGAAPSSKTSPQKPPTNPGDTHETSVPPSDDQNSTVSGGRKGGRGPRESRGQ
AQQRAVTSEPPLEGGRANSQGPIQPAPAGSGTQTTTMIALVGTPVTGARIKVQERSSVIG
QKRPVRAILPAPFNTGRALVQWITVPPHKGNVEKTNSSKATTELSEKMAGLKPNTLKQLG
QIVTTTPLEQTPPTPVDRSQYIVTDKVGKILSVVPLKQNSTATLDLGLSTARGRGRCKNP
SCGYVYKNRHKPPECPCCGWELSRKNAKGSKLQGGSVALLDPYRTLSPAQRELQRQSTLQ
LLRQALQIPESEAELHDTLALIQELNSTQVVLTTNQAGNQVLGEGEDQGGLGEVQVQSGW
PRFFESAATHCALCHYPLFKGGQSSLAGQEDCWLLTDSLIQTASLQLKVCLNPQCMALHS
FTDLHPGLFNVGNRLLVSLDLFFKIRSQVRLGRHPNQTVRTILDNIHIHPVHNLSPEELA
HVQELLVSGYWAFECLTVRDYNDMICGVCGIAPKMEIAQRYTHNVLELRNVEFTWPDFGA
PDEVHVDDFWLTMESEAIEQAAFPCSVPITRVDASIIAPFLPPLMRSSTVINTEKDKALL
LTQHTGDPSVLVRLIHEGQLRPDRMDEHSAEELKAILDCCGEITAPESNKDELLVSLISL
CTCVQNGLSTAPQPPPHLTAGKLSKICPHQVVCGSKYLVKGETARDHVDLLVSSRYWPPV
YVTDSARQVALCTDVQYPELASTMWGRNQGCFSDPMDKPEFVSCAELQDQPYSADLSSVV
ENPQVHPVTKSSSRWIVHPAGPTDVQEPRCLNHHSMGLCKELEPYCSLVQDLERDDNEEE
NEGKVGRKDGVKVEAEVTEGSEVTEEECSEGLVTSLRRRPLAFDNTAYYYLYNRLHDFLS
SREVVDQQISTVLKACQPGEVVIRDALYRLGVAQINTQEEEGEEGEGDGGVEGEGDEGEG
DGGRHLPELLLEGWLLMSGLFYHPHSAA
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatggaggtgtatgaggagactgatcggaggatgacagaggaggtggagagc
tgctacaccctcatggaggtcacctctcccaagaagaggaagaagaacaaggctcagcag
ggagagatcatggagaaacccaaaaaacccagatcagcctacctgctgtactactttgac
gtgcaccagaccatgcagcaggagttccccaacctgccccagtctgagatcaacaagcgc
atcagtgtgagctggaagaggctcaacgtggcagacaagggctactacctggagaaggcc
aagctggagaaggaagggacagacatgtcatctatgggcccttgccaggagctcccaggc
ttccgtaggatcctccccaggtccaactacgtcctcctgcccaaggggaccatgacagac
aacaggacagggtcccagctggaggtgtgtatggagggtctggactctcccgtgggggaa
ggagtgatgccctccctgtcccttggtaccccccagtaccctccccttgtgctgggctgc
gaggtggagctgtcggagcagtgcatcgccatcgatggcctgacagacgaggaggctgtg
accctgacacactccggggccctgcagggggtcctctcctcatcgtatcactcctcttcc
tctgcatcccacgactcccataatgcacctcacctggcggcagccggtctgctgctcaag
gaggaggagccgaggatggtgggcgggggctatagtgtcattggaatggcgactgacggg
ggacgtgtgggcgggacggtggtgcagcacgtgaaaacagagctggtcaccatcataccc
aatcaggatctgatggagcacaggacgttgccaggcgccagctctgtagcctctgttgtc
atggtacctgtaggagccagagtggtacgggacactaaaccctcatacaaactgtcgaaa
aagtacaccagaagaggccggggcagctgtcagacagcgggctgttccttcgtctacgtg
acccgtcacaaaccccccttctgccctgactgtggcaaccacctggggggcaagtgggtg
cccgctgcgaagaagtcttcagtgaaaggtgctgctccttcatccaagacttctccccag
aaaccaccaaccaaccctggggacacccatgagactagtgtgcctccctctgatgatcag
aacagtacggtgtctggagggcggaagggagggagaggaccgcgggagtctagaggacaa
gcgcagcagcgtgcagttacatcagaaccaccactagagggaggcagagccaacagccag
ggacccatacagcctgctccagcagggtcagggacacagacaactactatgatagctttg
gttggaacacctgtcaccggtgccaggatcaaagttcaggaaaggagcagtgtgattggt
caaaagcgacctgtgagagccatcctccctgccccattcaacacaggccgggccttagtc
cagtggattactgtccctcctcataaaggcaatgttgagaagaccaacagcagcaaagca
accacagagctcagtgagaagatggcaggtttgaagcctaacactctgaaacagctcggc
cagatcgtgacaacaacgcctctggaacagactccccctactcctgtggacagaagccag
tacattgtgactgataaagtagggaagattctctcagtggttcctctcaaacagaactct
accgccacactggacctgggtctgtctacggcgcggggcaggggtcgctgtaagaacccg
tcatgtggctatgtctataagaacagacacaagcctcctgagtgcccctgctgtggctgg
gagctgtccagaaagaacgccaagggctccaagctacagggtggttcagtagctctttta
gacccgtaccggaccctgtccccagcccagagggagctacagcgccagtccaccctgcag
ctgctgcgtcaggccctgcagatccctgaaagtgaggctgagctccatgacaccctggcc
ctcatccaggagctcaactccacccaggtggtcctcaccaccaaccaggctgggaaccag
gtgttaggggaaggggaggaccagggaggcctgggggaggtacaggttcagtcaggctgg
ccgcggttctttgagtctgcagccacacactgtgctctgtgtcactacccgctgttcaag
ggaggacagagttctttagcagggcaggaggactgctggctgttgactgactctctgatc
cagacagcctctctccagctgaaggtgtgtctcaacccccagtgtatggccctgcacagc
ttcaccgacctccacccaggtctgttcaatgttggcaacaggttgctggtgagtctggac
ctgttctttaagatccggagtcaggtcagactgggccggcatcctaaccagacagtcagg
accatcctggacaacatccacatccaccctgtccacaatctgagtcctgaggagttggcc
catgtccaggagctgctggttagtggctactgggcctttgagtgtctgacggtgagggac
tacaacgacatgatctgtggtgtgtgtggcattgcccccaagatggagatcgcccagcgg
tacacacacaacgtgctggagctcaggaatgtggagtttacgtggccagacttcggggct
ccagacgaggtgcatgtggatgacttctggctgaccatggagagtgaggccatcgagcag
gcagcgttcccctgcagcgtccccatcacccgggtcgacgcctccatcattgcccccttc
ctccccccactgatgaggagctccactgtcatcaacacagagaaggacaaggccctgctc
ctcacacagcacacaggtgacccgtcagttctggtgcgtctgatccacgagggccagctc
agaccggaccgtatggacgagcacagtgcagaggagctcaaagccatactggactgctgt
ggagagataactgcacctgagagcaacaaggatgagttgctggtctctctgatctccctg
tgtacgtgtgttcagaacggcctctccacggcccctcagccccctccacacctcacagca
ggcaagctgtccaagatctgcccccatcaggtggtgtgtggttctaagtacctggtgaaa
ggtgagacggcgcgggaccacgtggacctgctggtgtcctcccggtactggcctcccgtc
tacgttaccgactctgcccgccaggtggcgctgtgtacagacgtgcagtaccctgagctg
gcctccaccatgtggggcaggaaccagggctgcttctctgacccaatggacaaaccagag
tttgtgtcatgtgctgagctacaggaccagccttacagtgctgacctgtcctccgtggtg
gagaacccccaggtccaccctgtcaccaagtcctcttcccgctggatagtgcaccctgct
gggcctacagatgtccaggagccccgctgtctgaaccaccactccatggggctctgcaag
gagctggaaccttactgcagcctggtacaagacctggagagagacgacaatgaagaagag
aatgaagggaaggtggggaggaaggatggggtcaaggttgaagccgaggtaacagaaggg
tcagaggttactgaggaggagtgttctgagggtttggtgacatcattgcggcggcggcct
ttggcctttgacaacacagcctactactacctgtacaaccgtctgcatgacttcctgtcc
agcagggaggtggtggaccagcagatcagcacggtgctgaaggcctgccagcctggggag
gtggtgatcagggatgccctctataggctgggggtggcacagatcaacacccaggaagag
gaaggggaggagggggaaggagacgggggagtggagggggaaggagacgagggggaagga
gacggggggagacacttgcctgagctcctattggaggggtggctcctaatgtcaggactg
ttctatcatccacactcagctgcttga
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