Coregonus clupeaformis (lake whitefish): 121579077
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Entry
121579077 CDS
T08357
Symbol
si:ch211-288d18.1
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579077 (si:ch211-288d18.1)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121579077 (si:ch211-288d18.1)
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121579077
NCBI-ProteinID:
XP_041749289
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Position
3:42922829..42953961
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AA seq
557 aa
AA seq
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MIRRKSSYLFERVVKKRDRRSKRDKKEKPTGRQEGVEIDPWEDADYSIYRVTDRFGFLHD
EELPTPSAHEEKKKNLEIERVEKWLKMVKKWDKYRNSDRMVKRVYKGIPLQLRGQAWAMM
LDVEKVKNENEGKYERMKEQARIFSQEIKQIDLDVNRTFRNHIMFMDRFGVKQQSLFNIL
SAYSVYNTEVSYCQGMSQVAALLLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKLQR
FQTHHDQILSKLIPKLKKHLDREQMSCGIYSTKWFLQCFIDRTPFTLTLRLWDIYILEGE
KILTAMSYTILRIFKKRLLKMNLEDLREFLQEKIALSFLYSDDVIIDQLQASMAELSKMK
LDFPPPAKPEELPWKALGLELPVLLTPLKPPRGVTPDLGTKRPGAGGLGLHLITHQPEVI
SQDDSPSKEDRKDKEALNREEEEDPILIHTIQAQVTPDGPPQAGAGPPPYEPPGGNEHNV
MGQPAILMPLHHEVERSSGPVALPETQVVVQQGTNTPPQYPMEEPTLTAPVAPLSLSPPQ
LPCSVPRTRPAAYGPGP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaggaagagttcatacttgtttgagcgtgttgttaaaaagcgtgaccgtcgc
tctaagagggataagaaagagaaaccgacgggcagacaggagggggtggagattgacccc
tgggaggatgcagactacagtatttacagagtcactgaccgtttcggatttctgcatgac
gaggagttgccaacccctagtgcacatgaggagaagaaaaagaacctggaaattgaaagg
gtggaaaaatggctgaagatggtgaagaaatgggataagtacaggaacagtgacaggatg
gtaaagcgtgtctataagggtattcccctgcagctgagaggccaggcctgggccatgatg
ctggatgtggagaaggtgaagaatgagaacgaggggaagtatgagaggatgaaggaacag
gccagaatcttctcccaggaaatcaaacagatagatctggacgtgaacagaacgtttaga
aaccacatcatgttcatggatcgattcggagtcaaacagcagtctttatttaatatcctg
tctgcctattcagtctacaacacggaggtgagctactgccagggcatgagccaggtcgcc
gccttgctgctgatgtacatgaacgaggaagacgcattctgggccctgtcacagctactg
accaatcagaagcatgccatgcacggtttctttattcctgggtttcccaaactgcagcgc
ttccagacgcaccacgatcagattctctccaaactcatccccaagctgaagaaacatctg
gacagggaacagatgtcctgtgggatctacagcactaaatggttcctgcagtgtttcatt
gacaggaccccgttcaccctgactctacgcctgtgggacatctacattctggaaggagag
aaaattcttactgccatgtcctacacaatccttagaatatttaagaaacgtctcctgaag
atgaatttggaggacctgagagagttccttcaggagaagatcgccctgtcgttcctctac
agtgatgatgtcatcatcgatcagctgcaggcctccatggcggaactaagcaagatgaag
ctggactttccacccccagccaagccagaggagctgccatggaaggccctgggtttggag
ctacctgttctgctcacccctctcaagccccccaggggagtcacccctgacctgggtacc
aaacgaccaggagcagggggtctgggtctccacctcatcacccaccagccagaagtaatc
tcccaagatgacagcccctctaaggaggacaggaaggacaaggaagctctcaatagggag
gaagaggaagaccccattctcatccacaccatccaggctcaagtgacccccgatgggcct
ccccaggctggggctgggccaccaccttatgagccaccagggggcaatgagcacaatgtt
atgggacagcctgccattcttatgccactccaccacgaagtggagcgctcctctggtcca
gtggctttaccagagacacaggtcgtagttcaacagggtacaaacacacctccacaatac
cccatggaggagccgaccctgactgccccagttgcccccttatctcttagccctccccag
ctgccctgcagtgtcccccggactcgcccagcagcctacgggcctggcccatag
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