Coregonus clupeaformis (lake whitefish): 121579079
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Entry
121579079 CDS
T08357
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121579079 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121579079 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121579079 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121579079 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121579079 (ppp2r2d)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121579079 (ppp2r2d)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121579079 (ppp2r2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
TYW3
Motif
Other DBs
NCBI-GeneID:
121579079
NCBI-ProteinID:
XP_041749298
LinkDB
All DBs
Position
1:90715706..90756389
Genome browser
AA seq
452 aa
AA seq
DB search
MLKYTFKGVGGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIF
QREQESKNRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHSLLSTN
DKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLLPMDLMVEASPRRIFANA
HTYHINSISVNSDHETYLSADDLRVNLWHLEITDRSFNIVDIKPANMEELTEVITAAECH
PHQCNVFVYSSSKGTIRLCDTRAAALCDRQSKFFEEPEDPSSRSFFSEIISSISDVKFSH
SGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWSGSDS
AIMTGSYNNFFRMFDRNMRRDVTLEASRENSKPRAILKPRKVSTGGKRKKDEISVDSLDF
NKKILHTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtacacatttaaaggtgtcggaggagggaacgatttccaatggtgcttctct
caagtgaagggagccatagacgaagatgtggctgaagccgacatcatctcaacggttgag
tttaactattctggagaactactagcaacaggagacaagggaggtcgagtcgtcatattc
caacgggaacaagagagtaaaaaccgccctcactccagaggagagtacaatgtgtacagc
actttccaaagccatgaaccggagtttgactatttgaaaagtttagaaatcgaggagaaa
atcaacaaaataagatggttaccccaacaaaacgctgcacactccctgctctcaacaaac
gacaaaaccatcaagctatggaaaatcagtgaaagggacaaaagagcagagggctacaac
ttgaaagacgaggatggaagactgagagatccttttagaatcacatcattacgggtgcct
gtgttgctgcccatggacctgatggtggaggctagcccaaggaggatattcgctaacgca
cacacatatcacattaattccatttcagtaaatagtgatcatgaaacgtacctttcagca
gatgatcttagggtaaacctatggcacttagaaattacagatagaagttttaacattgta
gacattaagcctgccaatatggaggagctgacagaagtcatcactgctgcagagtgccac
ccacaccagtgtaatgtatttgtatacagcagtagcaaggggaccatccgcctctgtgac
acgcgagctgcggccctctgtgataggcaaagcaaattcttcgaggagccagaggaccct
agcagccggtccttcttctcagagatcatctcgtcaatatctgatgtgaagttcagccac
agcggccgctacatgatgaccagagactacctgtcagtcaaggtgtgggatctgaacatg
gaaaaccggcctgtggagacctaccaggtgcatgaatacctccgcagcaagctctgctcg
ctgtacgaaaacgactgcatcttcgacaagtttgagtgctgctggagtggttctgacagt
gccatcatgacgggctcgtacaacaacttcttccggatgtttgaccggaacatgcggagg
gacgtcacgctggaggcctctagagagaacagtaaacctcgggccatcctgaagccccgc
aaggtgtccaccgggggaaagaggaagaaggatgagatcagcgtagacagtctggacttc
aacaagaagatcctgcacaccgcctggcacccaaaggagaacgtcatcgctgtcgccgcc
accaacaacctctacatattccaggacaagatcaactaa
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