Coregonus clupeaformis (lake whitefish): 121579096
Help
Entry
121579096 CDS
T08357
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121579096 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
121579096 (smyd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
121579096
NCBI-ProteinID:
XP_041749326
LinkDB
All DBs
Position
13:complement(6426641..6437237)
Genome browser
AA seq
833 aa
AA seq
DB search
MDLPCVEWQKHVEQKWSRLTLDEKKCFSSLLDIDEVFDFGLSQIIQEDVDFLSGISKDYP
VQKDLERAARCRKEGNSSFTSRDYTAAVLHYSQGVCHASLSSEQLSMCYANRSAALFHLQ
RYRECLEDIDRALNHGYPSHLRHKLQDRHAQCLNHLPNGVEGPNTAEQGAGNQAEGVCSR
TNSTKPNPKSPNSQQQQQNGSAPVSRLSPGVSVCFSPGKGRHLLATEGIAAGEVIVEDRA
YSCVLIPGMGGGKGRERRGETEKAGGVFGTEERHCHLCLAETVSPVPCEGCSYARYCSEG
CRRGAWEWHHRWECPIGAELRAAGVMSQLALRVALKAGVKEVLKAREPIRDADNDSKPIR
EKISSENTSSKPVTEKISPKKKNSGSSDATSTEPEVNDPSVYYHGDSYRSIYHLLPHLNG
HAPSLRYLCSVTIATLYLRLHQAGPPPVSWEREGACESRKCSNQSQAPEEEEGDRWAPEL
SLLGSVALRHMLQLRCNAQAVSLLRDTGDLTAVQSTQEVRIATAIFPTLSVLNHSCCPNT
SLNFRTSHTHTSHLVSPELGSPQPDLGSTDELVSTGPGARSAPVSVCIRASRDISPGQEI
LHCYGPHSSRMVLCERRRRLKEQYHFLCICQACSLEQAEGPGGGAGPDTHLQCGKCKGPL
KQCSVDGAGWCVCLRSSCGHRVSRSELDLRLQEVRVQLEQAVDLLETDRPDQSVRLLQRA
VSQADVFLRETHSLQGQLADAMARAYCTMGEWRGAASQLERSVVAISSQYGEDSIELGRQ
LFKLAQLHFNGGFPGPALSVMSRARRLLSLHCGPHCPEVQELQAMEDCLQGAM
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacctaccgtgtgtcgagtggcaaaagcatgttgaacagaagtggagccgactcact
cttgatgaaaagaaatgcttctcgtccctgttggacatagatgaggtctttgattttggc
ctgtctcaaataatccaagaggacgttgactttctgtcgggcatttctaaggactaccct
gtccagaaggaccttgagcgagctgccagatgccggaaggagggcaacagcagctttaca
tccagagactacactgctgccgttctgcactactcacagggtgtgtgtcatgcgtctctg
agctcggagcagctctctatgtgctatgccaaccgttctgcagcactattccacctacag
cgctacagggagtgccttgaggacatcgacagagccctaaaccatggctacccaagtcac
ctacggcacaaactgcaggacagacacgcacagtgcctcaaccacctccccaacggggta
gaggggcctaacaccgccgaacagggcgcagggaaccaggcagagggtgtgtgtagcagg
accaactcaacaaagccgaatccaaagtccccaaactcccagcagcagcagcagaatggg
agtgctcctgtgtcgcgtctctcccctggtgtgtctgtgtgcttcagccctgggaaaggg
cgacacctgttggccaccgagggaatcgcggccggagaggtgatagtggaggacagggct
tacagctgtgtgcttataccagggatggggggagggaaagggagggagagaagaggagag
acggagaaagcagggggagtgtttgggacggaggagaggcactgtcatctgtgtttggcg
gagacggtgagccccgtgccatgtgaggggtgcagctacgctcgctactgctcagagggg
tgtcggaggggcgcgtgggagtggcatcatcgctgggagtgtccaatcggagccgagctg
agggctgcaggggtgatgtcacagctggcgctgagggtggcattaaaggcgggggttaag
gaggtactgaaggcacgggaaccaatcagagacgcggataatgattctaaaccaatcaga
gagaagattagctccgagaataccagttctaagccagtcacagaaaagatcagcccaaag
aagaagaattctgggtccagtgacgccacctctactgagcctgaggtcaacgacccctct
gtctattaccatggtgattcctaccggagcatctaccacctgctgcctcacctgaatggc
cacgcccccagcctgcgctacctgtgctctgtcaccatagcaacactctacctgcggctg
caccaggcgggacctccacctgtgtcctgggagagggaaggagcctgtgaaagcaggaag
tgcagcaaccaatcgcaggcccccgaggaggaagagggagaccgctgggctccggagcta
agcctgctgggaagtgtagctctgagacacatgctacagctgagatgtaatgcccaggca
gtgagcctgctcagagacacaggtgaccttactgcggtgcagtccacccaggaagtgcgc
attgccacagcaatattccccacactgagtgtcctaaaccactcctgctgccccaacacc
agcctcaacttcaggacctctcatacacacacctctcacctggtgtcacctgaactgggc
tcgcctcaaccagacctaggctctactgatgaactggtttctactggtcctggggctcgt
tctgctccggtctctgtctgtatcagagcatccagagacatctctcctggacaggagatc
ctccactgttatggtccccacagcagcaggatggtgttgtgtgagcgtcggcgccgctta
aaggagcagtaccacttcctgtgtatctgtcaggcctgcagtctggagcaggcggagggg
ccagggggaggggcagggccagacacacatctacagtgtgggaagtgcaagggacctcta
aagcagtgcagcgtggacggcgctgggtggtgcgtgtgtctgcggtcgtcttgcggtcat
cgtgtgtcacgctcagaactggacctcagactgcaggaggtcagagttcagctggagcag
gcggtggacctcctggagacagacagaccagaccagtctgtcaggttgttacagagagca
gtgtctcaggctgatgtcttcctgagagagactcattctctacagggacaactggctgat
gccatggccagagcatattgcactatgggtgagtggcgaggtgcagcgtcccagttggag
cgtagtgttgtagccatcagctcccagtatggagaggacagtattgaactgggaagacag
ctcttcaaactggcacagctacacttcaatgggggtttcccagggccagctctctctgtg
atgtccagggccagaagactcctgtccctccactgtggaccccactgtcctgaggtacag
gaactacaggccatggaggactgtctacagggggcgatgtaa
DBGET
integrated database retrieval system
