Coregonus clupeaformis (lake whitefish): 121579098
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Entry
121579098 CDS
T08357
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121579098
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121579098
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
121579098
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
FORS blood group (Forssman antigen)
121579098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
121579098
NCBI-ProteinID:
XP_041749330
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Position
13:complement(6793225..6840625)
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AA seq
393 aa
AA seq
DB search
MPIRREHFLLSLVMAGVMVLCWLVFSNCASVSLNQVHHQVVQNHRLQSKQANLMEPVLKS
KQANLMEPVLKSKQANLMEPVLKSKQANLMEPVLQSKQANLMEPVLKSKQANLMKPVRTD
VLTVTPWLAPVVWEGTFDPQVIDEAFMSQNLTIATTVFAVGKYTRFLRDFLESAEKHFML
GLDVHYYVFTDMPDDVPDNVTLGVGRLLSIVRVPKFDRWQEISLRRMEIIQTAIKDYIHQ
GANYIFCLDVDMRFHGRVGPEALGRLVAAIHPWFYMYPRSQYPYERRTVSKAYIPQDQGD
FYYQANIFGGALEDVHRLTKTCSEHLEVDRSVGVEAVWQEESHLNWYLVRNKPTKLLSPE
YVWDDAKGRDAKEIKLVRFSSVIKNKAEVRENL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcctataagacgtgaacatttcctgctttctttagtaatggccggggtaatggttctc
tgctggctcgtcttctcaaactgtgcatccgtgtctctcaaccaggtgcatcaccaggtt
gtgcagaatcacagattacagagcaagcaagccaatcttatggaaccagtattaaagagc
aagcaagccaatcttatggaaccagtattaaagagcaagcaagccaatcttatggaacca
gtattaaagagcaagcaagccaatcttatggaaccagtattacagagcaagcaagccaat
cttatggaaccagtattaaagagcaagcaagccaatcttatgaaaccagtgaggactgac
gtgctgactgtaaccccgtggctggctcctgtagtctgggaagggacttttgacccccag
gtcatagacgaggcctttatgtcccaaaacctcaccatcgctaccactgtgttcgctgta
gggaaatacactcgttttcttcgggacttcttagagtccgctgagaagcacttcatgttg
ggactggacgtacactactacgtgttcaccgacatgcccgacgacgtgcccgacaacgtg
actctgggtgtcggcagactgctcagcatcgtgagggtgccaaagttcgaccgctggcag
gagatatccctccgccgcatggagatcatccagactgccattaaggattacatccaccag
ggggcaaactacatcttctgcctggacgtagacatgaggttccacggccgtgtggggcca
gaggctctggggagactggtggccgccatccacccctggttctacatgtacccccggagc
cagtacccctacgagcggcggaccgtctccaaagcctacataccccaggaccagggagac
ttctactaccaggccaacattttcggaggagcgctggaggatgttcaccggctgaccaag
acttgcagtgagcacctggaggttgataggtcagtgggtgtggaggctgtgtggcaggag
gagagtcatctgaactggtacctggtgaggaacaagcccaccaagctgctgtcacctgag
tatgtgtgggacgacgctaaaggacgggacgccaaggagataaaactggtccgcttctcc
tctgtcattaagaacaaggcagaggtcagggagaacctgtga
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