KEGG   Coregonus clupeaformis (lake whitefish): 121579125
Entry
121579125         CDS       T08357                                 
Name
(RefSeq) la-related protein 1-like isoform X1
  KO
K18757  la-related protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121579125
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121579125
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 121579125
NCBI-ProteinID: XP_041749372
LinkDB
Position
13:complement(8097845..8156698)
AA seq 1121 aa
MATQVETLLPNNPLIKEEEHGHASKMIQHGEDCLEKGAKQTGVADDGSNMKADNSEQGGV
AMKEQNSKQAKEESNNQEKDILDQEKQTTGQTEDCVKCSKNEFAEAPPPKVNPWTKKMNA
VTVVNVNGQAHHEPPPTTGPAKVVKAPNPRPRRGGKVGDFGDAMNWPTPGEIATKETQIE
VVTGIVSCPMPVRQIREVGSTRRSPAPKKPVVKKEWKEKCDANEESKENRKARSDDSGEE
KNGDEDSQKNGQKKKGNKHKWVPLMMEVKSEGPRERSASRNNTRQNEVPRMPPNNRNDLR
DWHSGKYEREWREDHDEVSSVKSEGAPFRAGFRGRGRGRGRGRGRGRGGSSRGRYDYHHG
YKAYDGKDGAYGQKFGAPVTYYYDNMSSNDLYSVDQDLLKDYIKRQIEYYFSLDNLERDF
FLRRKMDQEGFLSLGLVASFHRVQALTTDVNLIIESLKGSKEVEIIEMKIRRKVEPEKWP
LPGLSMGPDHNQVDLTQLIHCPEFVPRQMPTEQTESAPGSPRSSTPTRGSTRASMQPKVE
QDVSNLKSMSKGLSASLPDLDSESWIEVKKRPRPSPARPKTPSLQQKDEAVSPVPQPGPS
PIPTAPSASSAMAAREEQDEPEELDFMFDEEMEQIDGRRNTFTDWSDDDSDCEIADNDVN
KILIVTQTPPYLRKHPGGDRTGNHTSRSKLTNELVKVINDGLYYYEADLWDDNYEPEYAT
IKQEVENFKKVHLISREEFDCLTPEPPVDPNQEVPPGPPKPQQIPVDALANKLFGAPEPS
TIARSLPTTVPDSPNYRSARTPRTPRTPHRKDPPMTPRFYPVVKESRPVDAMTPRKRKTR
HSSNPPMECHVGWVMDSREHRSRTASVSSNASPSEGIPALGGIGCTPQSLPKFQHPSHEL
LKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLV
VEDGKEGYRYGLECLFRYYSYGLERKFRPDIFKDFQEETMKDYEAGQLYGLEKFWAFLKY
SKNKNMEIDPKLQECLSKFKRLEDFRIDPPMEEGGRKRHSSSGDGRRRHPSQGSSRPHSQ
TGFGPALFAQGPAKDDAKNSSQSQRPAAQASATASDAKPPK
NT seq 3366 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagactctcctacccaataatcctcttatcaaagaagaggagcat
gggcatgcgagcaagatgatacaacacggagaggactgtctggaaaagggggccaaacag
acgggtgttgccgacgacggcagcaatatgaaagcagacaactcggaacaggggggggtc
gcaatgaaggagcaaaactccaaacaggctaaagaagagagtaacaatcaagagaaagac
atcctggatcaagagaagcaaacgactggacaaacggaagattgtgtgaaatgtagcaaa
aatgagtttgctgaagcacccccgcccaaggtgaacccatggactaagaaaatgaacgcg
gtgaccgtggtcaacgtcaatggacaagcacatcatgagccgccgcccacaacaggccca
gccaaggtggtgaaggccccaaacccccggcctcggagaggaggaaaggttggagatttt
ggcgacgctatgaactggccaaccccaggggagatcgcaactaaagaaacgcagattgaa
gttgtgactgggattgtgtcatgccccatgcccgtcaggcagatcagagaagtgggctcc
acacggagatccccagcccctaagaagcccgtggtgaagaaggagtggaaagagaaatgc
gacgccaatgaagagagcaaggagaaccggaaggccaggtcggacgactctggagaggag
aagaacggagacgaggactctcagaagaatggacagaagaagaaaggaaacaagcacaag
tgggtgccgctgatgatggaggtgaagtcggaggggcccagagagcgctcggcctccagg
aacaacacccgtcagaacgaggttcccaggatgccccccaacaacaggaacgacctccga
gactggcacagcgggaagtacgagcgtgaatggcgtgaggaccatgatgaggtgtccagc
gtgaagagcgagggtgctcccttccgtgccgggttccgggggcgtggtcgtggcaggggc
cggggccggggacgaggaagaggcggcagcagcagaggtcgctatgactaccatcatggc
tacaaggcctacgacggaaaggacggcgcctacggccagaagtttggcgctccagtgacc
tactactacgacaacatgagcagcaacgacctgtactctgtggaccaggacctgctcaag
gactacatcaagaggcagattgagtactacttcagccttgacaacctggagcgggacttc
ttcctgcgtaggaagatggatcaggagggcttcctgtctcttggcctggtcgccagcttc
cacagggtgcaggctcttaccaccgacgtcaacctcatcatagagtctttgaagggcagc
aaagaggtggagatcattgaaatgaagatccgtcggaaggtagaaccggagaagtggcct
ctaccaggtctgtccatgggaccggaccacaaccaggtggacttgacccagctcatccac
tgccccgagttcgtgccccggcagatgcccactgagcagacagaatctgctccagggtct
ccccggtcctccacgcccaccaggggctcgaccagggcctccatgcagcccaaagtggag
caggacgtgtccaacctgaagagcatgtccaagggtctgtcggcgagtctgcccgacctg
gactctgagtcctggatcgaggtgaagaagaggcccaggccctccccggcccgacccaag
accccctcgttgcagcagaaggacgaggctgtctccccggtgccccagccagggcccagc
ccgatccccacggccccctcggcctcctccgccatggcagccagggaggagcaggacgag
cccgaggagctggacttcatgttcgacgaggagatggagcagatagacggccgcaggaac
accttcaccgactggtccgacgacgactcggactgcgaaatcgccgacaacgacgtcaac
aaaatcctcatcgtgacgcagacgccgccttacctgcggaagcacccggggggcgaccgc
acggggaaccacacgtcgcgctccaagctgaccaacgagctggtgaaggtgatcaacgac
ggcctgtactactacgaagccgatctgtgggacgacaactacgaacccgagtacgccacc
atcaagcaagaggtggagaacttcaagaaggttcacctgatcagccgagaggagtttgac
tgcctgaccccagagccccccgtcgaccccaaccaggaagtaccaccgggaccccccaag
ccccagcagattcctgtagacgccttggcgaacaaactattcggtgcccctgagccttct
acaatagcacgctccctcccgactactgtgcctgactcgcccaactaccgcagtgcccgg
acaccccgcacgcctcgcaccccgcaccggaaggacccccccatgacgccccgcttctac
cctgtggtgaaggagagccggcctgtcgacgccatgaccccgaggaagaggaagaccaga
cacagctccaacccaccgatggagtgccacgttggctgggtgatggactcgcgagaacac
cggtcccgcaccgcctccgtcagctccaacgccagcccctcagagggtatccctgcgttg
gggggaattggctgcaccccccagtcgctccccaagttccagcacccatcccacgagctg
ctcaaggagaacggcttcactcaacacgtttaccacaagtaccgtcggcgctgcctaaac
gagcgcaagcggttgggcatcggccaatcccaggagatgaacacgctgttccgtttctgg
tcgttcttcctgagggatcacttcaacaggaagatgtacgaggagttcagacagctggtg
gtggaggacggaaaggagggatacaggtatggtctggagtgtctgttcaggtactatagc
tacggactggagaggaaattcagaccagacatcttcaaggacttccaggaggagaccatg
aaagactacgaagctggccagctgtatggactggagaagttctgggcgtttcttaaatac
tccaaaaacaagaacatggagatcgaccccaagctgcaggagtgcctgagcaagttcaag
cgtctcgaggatttcagaatcgatcccccaatggaggagggaggccgcaagagacactca
tccagcggagacggtcgccgccgccacccctcccagggctccagccgcccccacagccaa
actggcttcggcccagccctgttcgcccagggccccgccaaggatgatgccaaaaacagc
agccagagccagcgacctgcagcccaggcctcggccaccgcatcagacgccaagccacca
aagtaa

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