Coregonus clupeaformis (lake whitefish): 121579147
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Entry
121579147 CDS
T08357
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121579147
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121579147
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121579147
04261 Adrenergic signaling in cardiomyocytes
121579147
Enzymes [BR:
cclu01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
121579147
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase
Cation_ATPase_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF3738
Motif
Other DBs
NCBI-GeneID:
121579147
NCBI-ProteinID:
XP_041749406
LinkDB
All DBs
Position
13:complement(10970540..11041516)
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AA seq
1005 aa
AA seq
DB search
MDSAHTKSASEVLENFSVNENTGLTLEQVKSNFEKYGPNELPAEEGKSLWELVAEQFEDL
LVRILLLAACVSFVLALFEEGEETITAFVEPIVILLILIANAVIGVWQERNAENAIEALK
EYEPEIAKVYRMNRKAVQRIKAREIVPGDVVEIAVGDKVPADIRITSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGIVVSTGISTEIGKIRNQMA
ATEQEKTPLQQKLDEFGEQLSKVISLICVAVWIINIGHFGDPVHGGSWMRGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFVVDKVEDFSCAVHEFSITGSTYAPEGQVLKGDKVVQCGDYDGLLELATVCSMC
NDSSLDYNEAKGVYEKVGEATETALTTLVEKMNVFKTDTSGLSKVERAGACNSVIRQLMK
KEFTLEFSRDRKSMSVYCTPTSKPGSGSKMFIKGAPESVMERCQYLRVGTGKVPLTMPLK
EQLTSLIRDWGTGRDTLRCLGMATRDSPPKQQDMDLENSTKFAEYETGLTFVGCVGMLDP
PRKEVIGSIQLCAEAGIRVIMITGDNKGTAVAICRRIGIFGEDEDVMGKAYTGREFDDLP
IVSQRDAVKRARCFARVEPAHKSKIVGYLQSFDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLSDDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILG
LPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRNPKEPLISGWLFFRYLAIGG
YVGLGTVGAATWWYLFDDEGPQVSFYQLRHFMQCSEDNPMFQGIDCEVFESRYPTTMALS
VLVTIEMFNSLNSLSENQSLIRMPPWVNFWLLGAIVLSMSLHFLILYVEPLPLIFQVTPL
TWCQWIVVLKISIPVILLDELLKYISRNHLDDNDDKKYRNRQLKY
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcgcacactaaatccgcatctgaagttttagagaacttcagtgtgaacgaa
aacactggactcacacttgaacaagtgaaatcgaattttgaaaaatatggaccgaacgag
cttccagctgaagaaggcaagtccctatgggagctggtggcggagcagtttgaagacctc
ctggtcaggatcctgttgctagctgcctgcgtctcctttgtgctagctctgtttgaggag
ggggaggagactatcacagccttcgtggaacccatcgtcatcctgctcatcctcatcgct
aacgctgtgatcggagtctggcaggagaggaatgcggagaacgccatcgaggcgctgaag
gagtacgaaccagagatagccaaggtgtaccgcatgaaccgcaaggctgtccagaggatc
aaagcccgggaaatagttcctggggatgttgtggagattgccgttggtgacaaggtccct
gctgacatccggatcacctccatcaagtctaccaccctgagagtggaccagtctattctc
acaggcgagtctgtgtctgtgatcaaacacaccgaccccgtccctgaccccagagctgtc
aatcaagacaagaagaacatgctgttttctggcaccaacatcgctgcgggacgagccatc
ggcatcgtggtctccaccggcatatccacggagatcggtaagatcaggaaccagatggca
gccacggagcaggagaagacccccctgcagcagaaactggacgagttcggagagcagctc
tccaaggtcatctccctgatctgcgtggccgtctggatcattaacatcggccattttggg
gacccggtccatggggggtcctggatgcggggggccatctactactttaagatcgctgtg
gccctggctgtggccgccatccctgagggtctacccgctgtgatcaccacctgcctggcg
ctggggacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctctgtggag
accttgggctgcacctctgtcatctgttccgataagactggcacccttaccaccaaccag
atgtctgtctgcaggatgtttgtggtggacaaggtggaggatttcagctgtgctgtccat
gagttctctataactggctcaacctatgcccctgaaggacaagtgttgaaaggggacaag
gtggtgcagtgtggagattatgatggacttctggagctggctaccgtgtgttccatgtgc
aacgactcctcactggactacaatgaggccaaaggagtgtatgagaaggtgggcgaggcg
acagaaacggccctcactacactggtggagaagatgaacgtgttcaagactgacacgtca
ggcctcagcaaggtggagcgcgccggagcctgcaactcagtgatcagacagctgatgaag
aaagagttcactctggagttctctcgcgaccgcaagtccatgtcggtgtactgtaccccc
accagcaaaccaggctctgggagcaagatgttcatcaagggtgccccagagagtgtgatg
gagcgttgccagtacctgcgtgttggcacagggaaggtgccactgaccatgccgctgaaa
gagcagctgacctcactgatcagggactggggcacgggcagggacacgctgagatgcctg
ggcatggccacacgggactcgccacctaaacaacaggacatggatctggagaactccacc
aagttcgctgagtacgagacgggcctaacgtttgttggctgtgtgggcatgctggacccg
cccaggaaggaggtgattggttccatccagctgtgcgccgaggcgggcatccgtgtcatc
atgatcaccggggacaacaagggcacggccgtggccatctgccgacgcatcggtatcttc
ggcgaggatgaggatgtgatgggcaaggcctacacaggccgggagtttgacgacctgccc
atagtgtcccagagagacgctgtgaagcgggcacggtgctttgcccgcgtggagcctgcc
cacaagtccaagatcgtgggctacctgcagtcgtttgatgagatcactgccatgactggt
gatggagtgaacgacgcaccagccctgaagaaggcagagattggcattgccatgggctcg
ggcacagctgtggctaagtcagcatctgagatggttctgtctgatgacaacttctctacc
atcgtggcggctgtggaggagggcagagccatctacaacaacatgaaacagttcatacga
tacctcatctcctccaacgtgggagaggtcgtctgcatcttcttgaccgccatcttgggt
ctacctgaggctctgatcccggtccagttgctgtgggtcaacctggtgacagatggtctc
cctgcgactgccctgggcttcaaccccccagacctggacatcatggacaagcccccccgc
aaccccaaggagcccctcatctctgggtggctgttcttcagatacctggccatcggaggg
tatgttggtctgggcacagtgggtgctgccacctggtggtacctgtttgatgatgaaggc
ccacaggtgtccttctatcagctgagacacttcatgcagtgctcggaggacaaccccatg
ttccagggcatcgactgtgaggtgtttgagtcccgctaccccaccaccatggccctctcc
gtgctggtgaccatagagatgttcaactccctcaacagtctgtcagagaaccagtccttg
atcaggatgcctccgtgggtcaacttctggctgctgggagccatcgtcctctccatgtcc
ctccacttcctcatcctgtatgttgagcccctgcctctgatcttccaagtgacccctctg
acctggtgccagtggatcgtggtcctaaagatctccatccctgtcatcctattggacgag
ctcctcaagtacatctcccgcaaccacttagacgacaacgacgacaagaagtacaggaac
aggcagctaaaatattaa
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