Coregonus clupeaformis (lake whitefish): 121579148
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Entry
121579148 CDS
T08357
Name
(RefSeq) rabankyrin-5-like isoform X2
KO
K20129
rabankyrin-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579148
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121579148
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
ANK_LRRK2
FYVE_2
BACK
Ank_KRIT1
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
121579148
NCBI-ProteinID:
XP_041749410
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All DBs
Position
13:complement(11180499..11208904)
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AA seq
1170 aa
AA seq
DB search
MAEEEVAKLQKHLALLRQEYVKMQQKLADTERRCAMLAAQASGQGSTSALGAGAGDTFVS
RLLDIVTQLYQQDQYSDLKVTVGEMTLNAHKFVLAARSDAWSLANLASTSEMDLSDAKPE
VAMAMLRWAYTDNLELSEDDAFLIDLMKLANRFQLHLLRERCEKGVMSSVNVRNCIRFYQ
TAEELDATTLMNYCGEIIASHWDDLRKEDFSTMSAPLLYKMIKSKTEFPLHKAIKVERED
VVFLYLIEMDSQLPGKLNELDNNGDLALDLALSRKLESIATTLVNNKADVDMVDQSGWSL
LHKAIQRGDEFASTFLIRHSAQVNAATVGAVETPLHLVCSFSPRKHSGEVMSGMARIAEV
LLKTGANPNMQNSKGRTPLHEAVVSGNEPVFNQLLQCKQLDLELKDHEGSTALWLALQYI
TVSSDPNVNPFEEDAPVVENGTTFDENSFAAQLIQRGSNPDAPDTATENCLLQRAAGAGS
EAAALFLATHGAKVNHANKWGETPLHTACRCGLASLTAELLQQGANPNLQTQKALPDEAQ
GVSLQSPLHMAIIHNHPDVVSVILEQKANALHATNNLQIIPDFSLLDSMDQTVLGLALWT
GMHTIAAQLLGSGASINNTMSNGQTLLHMAIHRQDSKSALFLLEHQADINVRTQEGETAL
QLAISNQLPLVVDAICTRGADMSVVDKRGHPPLWLALENGLEDIASTLVRHGCDATSWSP
GPSGCQQTLLHRAVDENNEVTACFLIRSGCDVNSPRRPGPSGEGGEEARDGQSPLHLAAS
WGLEEVVQCLLEFGANVNTQDAEGRAPIHVAISNQHSVIIQLLISHPDIRLNVRDRQGMT
PFACAMTHKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNS
RVQDAAKQTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLATQQDLATICSVLL
ENGVDFTAVDENGNNALHLAVMQGRLNNVRALLTESNIDAEAFNLRGQSPMHVLGQYGKE
NAAAIFELFLECMPEYPLDKADNEGNTVLLLAYVKGNANLCRAVVRSGARMGLNNNQGIN
IFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECATKFGVTTRKHHCRHCGRLLCHKCSI
KEIPIIKFDLNKPVRVCEVCFDVLTLGGVS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaggaggtggccaagctgcagaagcacctagccctgctgaggcaggagtat
gtgaagatgcagcagaagctggctgacacagagaggcgctgtgccatgctggctgctcag
gcctctggccagggctccaccagcgccttaggagccggggcaggagacaccttcgtcagc
cgcctgctagacatcgtgacccagctctaccagcaggaccagtacagtgatctgaaggtg
acggttggagagatgacgctcaacgctcacaagtttgtcctggctgctcgcagtgatgcc
tggagcctggccaacctggcctctacctcagaaatggacctgtctgatgccaagccggag
gttgccatggcgatgttgcgctgggcctacacagacaacctggagctcagcgaggacgat
gccttcctcatcgacctgatgaagctggccaaccgcttccagctgcatctactccgagag
aggtgtgagaaaggggtgatgtcatcggtgaacgtgaggaactgtatccggttctaccag
acggctgaggagctggacgctacaaccctcatgaactactgtggagagatcatcgccagc
cactgggatgacctgaggaaagaggacttcagcactatgagtgctccgctgctctacaag
atgattaagtctaaaacggagttcccacttcacaaagccatcaaggtggagagggaagac
gtggtcttcctctacctcattgagatggactcgcagttgcctgggaagctgaatgaactg
gacaacaatggggacttggccctggacctggctctgtctcgtaaactggagagtatcgcc
acaacgctggtcaacaacaaggcagacgtggacatggtggaccagagtggctggagcctt
ctgcacaaagccatccaaagaggggatgagttcgcctccaccttcctgatccgccactcg
gcccaggtgaacgcggccacggtcggggcagtggagacccccctgcacctggtgtgttcc
ttcagccccaggaagcactctggggaggtgatgagtggtatggcccgcatcgcagaggtc
ctgctcaagacaggggccaaccccaacatgcagaacagcaagggcagaactcctttacat
gaagcggtggtgtcggggaacgagccggtgttcaaccagctcctgcagtgcaaacagctg
gacctggagctgaaggaccatgaggggagcacagctctgtggctggccctgcagtacatc
accgtgtcctctgaccccaacgttaaccccttcgaggaagacgctccggtggtggagaac
ggaacaacgtttgatgaaaacagctttgcagcccagctcatccagagaggcagtaaccca
gacgcaccagacaccgccacagagaactgcctcctgcagagggcagcaggtgcaggcagt
gaggccgccgccctcttcctggccacacatggggcaaaggtcaaccatgccaacaaatgg
ggtgagacccctctccacacggcgtgtcgctgtggtctggcaagtctgacggcagagctg
ctccagcagggggctaaccctaacctgcagacccagaaggccctccccgacgaggcccag
ggggtgtccctgcagagccccctccacatggccatcatacacaaccaccccgacgtggtg
tcagtcatcctggagcagaaagccaatgctcttcatgccaccaacaacctgcagatcatc
ccagatttcagcctcctagactccatggaccagacggtgttgggtctagccctatggaca
ggtatgcacaccatagcagcccaactcctgggctctggggcgtccatcaacaacaccatg
tccaacggtcagacccttctccacatggccatccacagacaggacagcaagagtgccctg
ttcctcctggaacaccaggctgacatcaacgtcaggacccaggagggagagacggcgctg
cagctggccatcagtaatcagcttcccctggtggtggacgccatctgcactcggggggcg
gacatgtccgtggtggacaagaggggacacccccctctgtggctggccctggagaacggc
ctagaggacatcgcctccacactggtccgacacggttgtgatgccaccagttggagccca
ggtccctcaggctgtcagcagaccctcctccacagggctgtggacgagaacaacgaggtc
actgcctgcttcctcatccgcagtggttgtgatgtgaacagcccgcggcgtcctggtcct
agcggagaggggggtgaggaggccagggacggacagtcacccctccacctggcagccagc
tgggggttggaggaggtggtgcagtgtcttctggagtttggggccaacgtcaacacacag
gacgccgagggccgagctccaatccacgttgccattagcaaccagcacagcgtcatcatc
cagctgctcatctcccacccggacatccgtctgaacgtacgtgaccgccagggcatgacc
ccctttgcctgtgccatgacccacaagaacaacaaggctgcagaagccatcctcaagaga
gagcctggggctgccgaacaggtggacaacaaagggcgtaacttcctgcatgtggcggtg
cagaactctgacatcgagagtgttctgttcctgatcagtgtccaggccaacgtgaactcc
cgggtgcaggacgctgccaagcagacccctctacacctggctgttcaggctggctccgaa
attatcgtccgtaacctgctgctggccggggccaaagtgaatgagctgaccaaacacaga
cagaccgctctccacttggcgacccagcaggacctggctactatctgctctgtgctgctg
gagaacggagtggacttcaccgctgtggacgagaatggcaacaacgccctgcacctggcc
gtaatgcagggtcgccttaataatgtgcgagcccttctcacagagtccaacatcgacgct
gaggccttcaatctccggggccagtcaccgatgcacgtcctggggcaatatgggaaagag
aatgcggcggccatctttgagcttttcttggagtgtatgcctgagtaccctctggacaaa
gcggacaatgaagggaacacagttctgttgctggcctacgtgaagggcaacgctaacctg
tgtcgtgccgtcgtgaggtctggggctcgaatgggcctcaacaacaaccagggaatcaac
atcttcaactaccaagtagccaccaagcagctgctcttccgccttctagatatgttgtcc
aaagagcccccgtggtgtgatggatcaaactgttatgaatgtgctaccaagtttggagtc
accacaaggaaacatcactgccgtcactgcggccgcttgctctgccacaagtgttctata
aaggagatccccatcattaagtttgacctgaacaagcctgtgagggtctgtgaggtgtgc
tttgacgtgctgactctgggtggggtgtcctaa
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