Coregonus clupeaformis (lake whitefish): 121579179
Help
Entry
121579179 CDS
T08357
Name
(RefSeq) RING finger protein 145-like isoform X1
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579179
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579179
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121579179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-P11
Prok-RING_4
Rtf2
RINGv
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121579179
NCBI-ProteinID:
XP_041749471
LinkDB
All DBs
Position
13:33770701..33808015
Genome browser
AA seq
721 aa
AA seq
DB search
MAVKDKLEAVLNVGLRVPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQHLVKLYLYVLTALLLFAGHQVSRDYVRSELDSGYEGPLYLEPLSM
NRFSTALLGQMVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFINRFAMIFTG
LEVIYFLATNLLVPYNLAKTAYRELVQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFA
LQIYSYFSSRDKPTSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFVVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYIIFMVEEVRKEPVENMDDVIYYVNGTYRLLEFLVALVVVAYGVSETVFG
EWTVMGSTIIFIHSYYNVWLRAQLGWQSFLLRRDAVNKIKSLPTASDLQLEQYSDICAIC
YQDMKSAVITPCSHFFHAGCLKKWLYVQETCPLCHKPLKSQSQPANATAAPAQDILPANP
NPAEAGQGEPVAGAAEGDKTVTHNGVPVEGSQASPSSSPANPDLELEGQAEERALGPQQT
DTVDSACLEGQVAGLSQGSGESCLRHRQRQQSAPSPAATPSTACAAELQSQLQQSASPCC
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggacaagctggaagcggtgctgaacgtgggtctgcgggtccccagcatc
atgctgctggaggtactctaccgctgggacgtcagctccttcttccagaagatccagagg
agcagcctcaacaacaaccctctcttccagtacaagtacctggctctctacctgcactat
gtaggttacatcctcagcctggtgctcctgactctgcctcgtcagcacctggtgaagctc
tacctgtacgtgctcactgccctgctgctcttcgctggacaccaggtctccagggattat
gtccgcagtgagctggactctgggtacgagggaccactctacctggagccgctgtccatg
aaccgcttctccaccgccctcctaggtcagatggtggtgtgcaccctgtgctcctgcgtc
atgcagaccaagaggatctggctgttctctgctcacctgctccccctggtggcccgtctc
tgtctggtccccctggagaccattgtgttcatcaaccgcttcgccatgatcttcacaggc
ctcgaggtcatctatttcctggccaccaacctgctggtgccatacaacctggccaagacc
gcctacagggagctggtgcaggtggtggaggtgtatgggctgctggctctggggatgtcc
ctgtggaaccagctggttctgcccgtcctcttcatgtgcttctggctggtgctgtttgcc
ctgcagatctacagctacttcagtagccgggacaagcccacctccagagagaggctgctc
ttcctcttcctcaccagtattgcagagtgctgcagcactccctactccctgctgggcctg
gtctttacggtttccttcgtggcgctgggtgtcctcaccctctgcaagttctacctgcag
ggctaccgggccttcatgaatgacaacaccatgcaccgggggatgacagagggcatcacg
ttactgatcctggctgtacagacgggtctgatcgagctgcaggtcatccaccgagccttc
ctcctcagtatcatcctcttcgtcgtggtggcctccattctacagtccatgctggagata
gctgaccccatcgtactggctctgggggcctcccgggacaagagcctgtggaagcacttc
cgggccgtgagcctgtgcctgttcctgctggtgttcccagcctacatggcctacatgatc
tgccagttcttccacatggacttctggctactcattatcatctcctccagcatcctcacc
tcactgcaggtgctgggcaccctgctcatctacatcatcttcatggtggaggaggtccgt
aaggagcccgtggagaacatggacgacgtcatctactacgtgaacgggacctaccggctg
ctggagttcctggtggcgctggtggtggtggcctacggcgtgtcggagacggtgttcggg
gagtggacggtgatgggctccaccatcatcttcatccactcctactacaacgtgtggctg
cgcgcccagctgggctggcagagcttcctgctgcggcgagacgccgtcaacaagatcaag
agcctgcccaccgcctctgacctgcagctggagcagtacagcgacatctgcgccatctgc
taccaggacatgaagtctgccgtcatcaccccctgcagccacttcttccatgctggctgt
ctcaagaagtggctatatgtacaggagacctgccccctttgtcacaaaccgctgaagagc
caatcacagcccgccaatgccactgctgcacccgcccaggacattctaccagccaatccc
aacccagcagaggctgggcaaggagagccagtggccggtgcggctgagggggacaaaacc
gttactcataacggtgttcctgttgaagggagccaagccagcccctcttcctcccctgct
aaccctgacctagagcttgagggccaggcagaggaaagggccctgggcccccagcagact
gacacagtggacagtgcgtgtttggagggccaggttgctggtctgtcacagggctcaggg
gagtcatgtctccggcatcgccagcgccagcagtctgccccctcccctgctgcaacaccg
tccacagcatgtgcagctgaactccagtcacaactacaacagtctgccagcccctgctgc
ctctga
DBGET
integrated database retrieval system
