Coregonus clupeaformis (lake whitefish): 121579193
Help
Entry
121579193 CDS
T08357
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579193 (msx2b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121579193 (msx2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121579193
NCBI-ProteinID:
XP_041749497
LinkDB
All DBs
Position
13:10117196..10121457
Genome browser
AA seq
261 aa
AA seq
DB search
MSAHVSLRDSSSSEEDSRPELERTMDDRKTHVTTHHHPFSVEAIMSGRKIHSEFTKQPDN
VSVVTFSKTQNSPYLCRETYSPPAGIRKHFIPPSPVKSESSEPDDCAPWVMSPRFSAQTR
HVSPTCPLRKHKTNRKPRTPFTTSQLLSLERKFRQKQYLSIAERAEFSSFLTLTETQVKI
WFQNRRAKAKRLQEAELEKFKMAAKPALHPGFTLPMPLGAQLHTAVSLYGQSYPYHRPML
PLSPMGLYATPLGYSMYHLSG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccatgtgagtttgagggatagcagttcatcggaggaggacagccgaccggag
ctggagaggacgatggatgaccgcaaaactcatgtgacaacacaccatcatcccttcagt
gtggaggctataatgtcgggtagaaagattcacagtgagtttacaaaacaacccgacaat
gtctctgtggttacattttcaaagactcagaactctccgtacctgtgcagagagacttac
agccctcccgctggaatccgaaagcactttatcccaccgtcgcccgtaaagtcggagtca
tccgagccggacgactgtgctccctgggttatgagcccaagattctctgcacaaactcgg
catgtaagtcctacctgtcctctgcggaagcacaagaccaacagaaagcctcgtactccc
ttcaccacctcccagctgctgtctctggagcgtaaattccgtcagaagcagtacctgtct
attgccgagcgggccgagttctccagctttctgaccctgactgagacccaggtcaagatc
tggttccagaaccgccgggccaaggccaagagactacaggaggctgagctggagaagttc
aaaatggctgccaaacccgcgctgcacccaggctttacattacccatgcccctgggagcc
cagctccatacagctgtctccctctacggacagtcctacccctaccaccggcccatgctg
cccctctcaccgatggggctgtacgctacaccgctgggctacagcatgtatcatctatca
ggatga
DBGET
integrated database retrieval system
