Coregonus clupeaformis (lake whitefish): 121579198
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Entry
121579198 CDS
T08357
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121579198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579198
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121579198
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121579198
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
121579198
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Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121579198
NCBI-ProteinID:
XP_041749505
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Position
13:27755243..27870852
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AA seq
812 aa
AA seq
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MCVHKQWTIRYQQIPGGPTGAASDEHVPKNSDGAQEEELQGGLQDQEMDPGGLKHSNNQD
KGLAFGKLSESCVEGSFSGEAGGSKSTTSTSLMHLPGPRTQPPARDSSNGLNVTKTQGEL
SAPGTASMGLTIEEAEVKVMEKALRMQLPQKPQQNQQLFENFALLEASIADLNRSNTPGS
SVLGRPHDLFSLKAENFSPMDKDRLDMGSVSFGQSQTDLDVNERLLGDNTLDILRDLDLP
GSLSDLNEFYVADEAAFLSSLSVEDSLLEDGNMETKPIDRSNGGNCTNVDSADQQQQLLE
PGISMPVIKTEEDADTSFIQLCTPGVIKQENDRRSYCQLSSLDMPGTHNSVGSMIGPNYH
YGANTSTAVSLQQDQKPVFGLYPPLPSVSDSWNRGNGYGDGSGMSSSSFPVSFSSPTARP
EASGSTSSAPAKPSGPTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGWRARQNTDG
QHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLIRLKGQQTTMEPSPP
PPDERACALIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTLNRLGGQQV
VSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCFAPDLVIND
ERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQVVFDEIRM
AYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEIVGGLLQICFYTFVNKSLSVEFPE
MLAEIISNQLPKFKDGSVKPLLFHALNHDTMP
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtccacaagcagtggaccatcagatatcagcaaatcccgggaggacccaccggt
gcagccagtgatgaacatgtaccaaagaactctgatggggcacaggaggaggagcttcaa
ggcggcctgcaggatcaagaaatggatccaggtggactgaaacacagcaataaccaggac
aagggcttggcttttggtaaactctctgagagctgtgtagagggaagcttctcgggtgaa
gcaggcggttccaagtccaccacatcaacctccctgatgcatctgcctggccccagaacc
cagcctccagccagagactcctccaacggactgaatgtcactaagactcagggggagctc
tccgcaccagggacagcctccatgggactcactatagaggaggctgaagtgaaggtaatg
gagaaggccctgagaatgcagctgccacagaaaccgcagcagaaccaacagctgtttgaa
aactttgctctgttggaggcgagtattgcagatttgaatcgatccaacaccccaggaagc
tctgtacttggacgccctcatgaccttttctctctgaaagctgagaacttctcacccatg
gataaggacaggcttgacatggggtcagtcagctttggacagtcacagacggacttggat
gtcaacgagaggctccttggcgacaatacgctggacattctgcgggatttggacttgcct
ggctctctgtctgatctgaatgagttttacgtggctgatgaggctgctttcctttcctcc
ctgtcagtggaggattccctgctcgaggacggcaacatggaaaccaagcccatagaccgt
agcaatgggggaaactgtacaaatgtggacagcgcggaccagcaacagcagcttctggag
ccaggcatctccatgcctgtcatcaagacggaggaggacgctgacacctccttcatccag
ctttgcaccccaggggtcatcaagcaagagaatgatcgtcggagctattgtcagctatcc
agcctggacatgcctggtacccacaactctgttggctccatgatcgggccgaattaccac
tacggagcaaacacctcgacagcagtgagtctacagcaggatcagaagcctgtctttggc
ctgtatcccccactgccctcggtcagtgacagctggaacagaggcaacggatacggggat
ggatcagggatgtcgagctcatcttttcctgtcagcttcagcagtccaacggccagaccc
gaggccagcggctccacgtcgtcagcccctgccaagcccagcggtccaacccataagatc
tgcctggtgtgttcggacgaggcgtctggttgccattatggagtcctcacctgcggaagc
tgcaaggtcttcttcaagagggccgttgaaggatggagagcacgacaaaacacagatgga
caacacaactatctgtgtgctgggaggaacgactgcatcatagacaagatccgcaggaag
aactgcccggcatgccgcttccgcaagtgtctccaagcagggatgaatctggaagcgagg
aaaaacaagaagctgatccgattaaaaggtcagcagaccacaatggagccgagccctccc
ccacctgacgagagggcctgcgccctgatccccaagtccatgccccagctggtgcccacc
atgttgtccctgctcaaagccatcgagcccgaggctatttactctggttacgacagcacc
attcccgacacctccacccgcctcatgaccaccctcaacaggctgggcggacagcaggtc
gtctcagccgtcaagtgggccaagtccctaccagggttccggaaccttcacctggacgac
cagatgaccctgctgcagtgctcctggctgttcctcatgtccttcggcctgggctggcgc
tcctaccagcagtgtaacgggggaatgttgtgcttcgcccctgacctggttattaatgat
gagaggatgaagctgccctacatgactgaccagtgtgagcagatgctgaagatctccacg
gagtttgtgaggctgcaggtgtcctacgacgagtacctgtgtatgaaagtcctgctgctg
ctcagtacagtaccaaaggatggattgaagagccaggttgtgtttgatgagatccgcatg
gcctacatcaaggagctggggaaggccattgtcaagcgggaagagaactccagccagaac
tggcagaggttctaccaacttactaagctactggactccatgcaggagatagtggggggc
ctcctgcagatctgtttctacacatttgtgaataaatccctgagcgtggagttcccggag
atgctggccgagatcatcagcaaccagttaccaaaattcaaagatgggagcgtcaagcca
cttctgtttcatgccttaaaccatgacacaatgccttaa
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