Coregonus clupeaformis (lake whitefish): 121579210
Help
Entry
121579210 CDS
T08357
Name
(RefSeq) septin-8-A isoform X1
KO
K16939
septin 6/8/11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121579210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121579210
04812 Cytoskeleton proteins [BR:
cclu04812
]
121579210
04147 Exosome [BR:
cclu04147
]
121579210
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121579210
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
121579210
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121579210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
Roc
AAA_16
RsgA_GTPase
Ras
AAA_22
AIG1
DUF5906
AAA_7
ABC_tran
RNA_helicase
RHD3_GTPase
DUF87
AAA_29
DUF8104
YceD
ATG14
CLP1_P
Motif
Other DBs
NCBI-GeneID:
121579210
NCBI-ProteinID:
XP_041749529
LinkDB
All DBs
Position
13:28338233..28372355
Genome browser
AA seq
474 aa
AA seq
DB search
MAATDVDIFSNEEKRNLSLGGHVGFDSLPDQLVSKSVTQGFCFNILCVGETGIGKSTLMN
TLFNTMFENEEASHYQNGVCMRPRTYDLQESNVHLKLTIVDTVGFGDQINKEESYKPIVD
YIDTQFENYLQEELKIKRSLFNYHDGRIHICLYFISPTGHSLKSLDLVTMKKLDSKVNII
PIIAKADTISKSELHKFKIKIMSELVSNGVQIYQFPTDDDAVTEINSSMNAHLPFAVVGS
IEEVKVGNKMVRARQYPWGVVQVENESHCDFVKLREMLIRVNMEDLREQTHTRHYELYRR
CKLEEMGFTDTDPDCQPFSLQETYEAKRKEFMGDLQKKEEEMRQMFVNKVKETEAELKEK
ERELHNKFEQLKHMHQEEKRKVEEKRRDLEEEMNAFNRRKVAAETLALAQPLKKDKDKKN
RSVKTENQSGVNLSNSKVMMAKSSVEPLKCDSWWQAVQCCTCLVHNATWKQGLF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacggacgtagacatattttctaatgaagaaaagcgtaacctcagtttgggc
ggccatgttggttttgacagccttcccgatcagctggtcagtaaatcggtgacacagggt
ttctgcttcaacatcctctgtgtaggggaaacgggtattggcaagtcgacgttaatgaat
acgctttttaacacaatgtttgagaacgaggaggccagccactaccagaatggcgtgtgt
atgcggcccagaacatacgacctccaggagagcaacgtccacctcaagctgactatcgtg
gacaccgtggggttcggggaccagatcaacaaagaggagagttataaaccgatagtggac
tatatcgacacacagtttgaaaactacctccaggaagagctgaaaatcaagcgctccctc
ttcaactaccacgacgggaggatccacatctgtctgtacttcatctctcccacggggcat
tcgctgaaatctttggatttagttaccatgaagaaactggacagcaaggtgaatataatc
cccatcatcgctaaagccgatacaatctccaagagcgagctccataaattcaagatcaag
atcatgagtgagctggtgagcaacggagtgcagatctatcagttccccacagacgacgac
gcagtcacagagatcaactcctccatgaatgctcacctccccttcgctgtggtgggtagc
atcgaggaggttaaagtgggaaacaaaatggtgagggccaggcagtacccctggggagta
gtacaagtggagaatgagagccactgtgactttgtgaagctgcgtgagatgctgattagg
gtcaacatggaagaccttagagagcagactcacaccagacactacgagctctaccgccgc
tgcaaactggaggagatgggattcacagatacagaccccgactgtcagccgttcagtctc
caggagacctatgaggccaagaggaaagagttcatgggagacctgcagaagaaagaggag
gagatgcgacagatgtttgtcaacaaagtgaaggagactgaggcagagctgaaagagaag
gagagagagttgcacaacaagtttgagcagctgaagcacatgcaccaggaggagaagagg
aaggtggaggagaagaggcgggacctggaggaggaaatgaacgccttcaaccgcaggaag
gtggcagctgagacgttggccttagcccagccactcaagaaggacaaggataaaaaaaac
agatcggtaaagactgagaaccagtctggggtgaatctctccaactccaaggtaatgatg
gccaagtccagtgtggagcctttgaaatgcgacagctggtggcaggccgtacagtgctgc
acctgcctggtccacaatgccacctggaagcaaggcctcttctga
DBGET
integrated database retrieval system