Coregonus clupeaformis (lake whitefish): 121579212
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Entry
121579212 CDS
T08357
Symbol
gabrg2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121579212 (gabrg2)
04082 Neuroactive ligand signaling
121579212 (gabrg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121579212 (gabrg2)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121579212 (gabrg2)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
121579212
NCBI-ProteinID:
XP_041749533
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Position
13:complement(28728484..28789637)
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AA seq
476 aa
AA seq
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MVIIAPPNLESKCSTAMAKPSFSLKLFLWVFVLANLPTSSLQTENDDDVTNKTWVLTPKV
YESDVTNILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTW
YDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYT
LRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFS
FVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV
PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFVS
NRKPSTKKDKKKKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLDG
KDCTSFFCCFEDCRSGAWRHGRLHIRVAKIDSYARIGFPTAFGLFNLVYWISYLYL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcattgctcctccaaatttagaatctaaatgctcgacagcgatggcgaagcct
tccttctctctaaagctatttctttgggtgtttgtactcgctaatcttcctacaagctcc
ctgcagactgaaaatgacgatgatgtgacaaacaaaacgtgggtgttgactcccaaagtg
tacgagagcgatgtcaccaacatcctaaacagcctactagatggctacgataacaaactg
cgaccagatataggagtcaaaccaaccgtgatccacacggacatgtttgtcaacagtatc
ggcccagtgaatgctatcaatatggagtacaccatcgacatattttttgcccagacatgg
tacgaccggaggttaaagttcaacagtaccatgaaggtattgcgtctcaacagcaacatg
gtgggcaagatctggatccctgacaccttcttccgcaactccaaaaaggccgacgcccac
tggatcaccacacccaatcgtatgctccggatctggaacgacggacggatactttacaca
ctgcggttgactattgatgccgagtgccagcttaaactgaacaacttcccaatggatgag
cactcctgtccgctggagttttcgagctatggctaccccagagaggagatagtgtacaag
tggaagaggagctccgtggaggtgggagacatccgctcctggaggctctaccagttctcc
ttcgttggcctgaggaacaccagcgagatcgtcaggaccgtgtcgggagattacgttgtg
ctgacagtcttcttcgacttgagcagaaggatgggttacttcaccattcagacctacatc
ccctgcactctcatcgttgtcctctcctgggtctccttctggatcaacaaggatgctgtg
cctgctagaacatccttaggcatcaccactgtgctgaccatgactacgctgagtaccata
gccaggaagtcgctgcctaaggtgtcctacgtgacggccatggacctctttgtgtccgta
tgcttcatcttcgtctttgccgcgctgatagaatacggaacactgcactactttgtaagc
aacaggaagccaagcacaaaaaaggacaagaagaagaaaaacccgctcctccggctcttt
tcctcaaagcagacccctacggtggacatacggcctcgctcagccaccgccatccagatg
aacaacgccacccacatgcaggagcgagatgaggagtatggctacgagtgcctggacggc
aaggactgcaccagcttcttctgctgtttcgaggactgccgctccggggcctggcggcat
gggcggttgcacatccgtgtcgccaagatagactcgtacgctcgcatcggtttccccacc
gctttcggtctctttaaccttgtttactggatctcctatctctatctctag
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