Coregonus clupeaformis (lake whitefish): 121579213
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Entry
121579213 CDS
T08357
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121579213 (gabra1)
04082 Neuroactive ligand signaling
121579213 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121579213 (gabra1)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121579213 (gabra1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121579213
NCBI-ProteinID:
XP_041749537
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Position
13:complement(28843553..28874371)
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AA seq
463 aa
AA seq
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MGGRTGTAILLCVWACLLVANVLCGKSSGQNGQTAEQKDNTTVFTRILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggccatactactatgtgtttgggcctgtttgctggtggcc
aacgtgctttgtgggaaaagctctggacagaatggccagacggctgagcagaaagacaac
accacagtgttcacccggatcctagacagcctcctggatggctacgacaaccgtctcaga
ccagggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattggg
cccgtctcggaccatgacatggaatacaccattgatgtgttcttccgtcaaagctggaag
gacgaacggctaaaatttaaagggccaatggcggttctccgtttgaacaacctgatggcc
agtaaaatctggacccctgacacattctttcacaatggcaagaagtctgtggcccacaac
atgactatgcccaacaaactcctacgaatcacagaggagggaactctgctctatactatg
agactgaccgtgagggcagagtgtcccatgcacctggaagacttccccatggatgcccat
gcttgcccactgaagttcggcagttatgcttacaccagggctgaggttgtgtacgtgtgg
acgagaggggcagcccagtctgttgtggtggctgaagatggctctcggctcaaccagtat
gatctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgtt
gtcatgacgacacacttccacctgaagaggaagattggttattttgtcatccagacgtac
ctgccctgcattatgacggtgatcctgtcccaggtgtccttctggctcaacagagagtcc
gtcccagccaggactgtgttcggagtgacaactgtgctgaccatgaccaccctcagtatc
agtgctaggaactctctcccaaaggtggcctatgccacagccatggactggttcattgca
gtctgctatgcctttgtcttctctgccctcattgagtttgctacagtcaactactttaca
aagaggggctacgcctgggacggaaaaagtgtggtgccagagaagcaaaagaagaagaaa
gagtccctcctgaagaagaacaacaccacagcttacaccgccgccactgctacagccttc
gctccaaacattgccagagatcctggtttggccaccattgccaaaagcgccccccctccc
cccaccgagcccaaggaagaacccaagcccaagccaccagaggctaagaagaccttcaac
agcgtcagcaagatcgacaggatcgccagaatagccttcccgttactcttcggaaccttt
aacctggtctactgggcaacctacttgaataaaaagcccaagttacaggggatgaccccg
ggatcccactaa
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