Coregonus clupeaformis (lake whitefish): 121579215
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Entry
121579215 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121579215
04082 Neuroactive ligand signaling
121579215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121579215
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121579215
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121579215
NCBI-ProteinID:
XP_041749543
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All DBs
Position
13:28936854..29021950
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AA seq
420 aa
AA seq
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MAVLRIRKMSYFGVWTFLVIVAVVCAQSVNDPSNMSIVKETVDRLLKGYDIRLRPDFGGP
PVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGHNAVTGVERIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKEAVANNEKMRMDPN
KWLVGNVVQRDDTLYARMKQRDIDAHDSMWEPIFVDDAAIGLGEEKNKASDHIPVFHPFI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgttgagaataagaaaaatgagctactttggggtttggacctttctcgtaata
gtggctgtggtctgtgcgcaaagtgtcaatgaccctagcaatatgtcaatcgtaaaagaa
acggtggatagactgttgaaaggatatgacattcgcttgaggccagatttcggaggtccc
cctgtgggagtggggatgaacatagacatagccagtatagacatggtatctgaagtcaat
atggactatacattgactatgtatttccagcaagcttggcgagacaagcggttatcctac
tcggagattcccctcaatctcaccctggataaccgggtagcggatcagctgtgggtccca
gacacctacttcctaaatgacaagaagtcatttgtccatggtgtcacagtgaaaaacaga
atgattcgactccatccagatggaaccgtgctctatagcctgaggatcaccactacagca
gcttgtatgatggacctgagacgatatccgctggacgaacaaaactgcacactggagata
gagagctatgggtacaccactgatgacatagagttctactggcgaggaggtcacaacgct
gtgacgggggtagagagaatagaactaccccagttctccatagtggaccacaaactcatc
tccaagaatgtcgtcttctctacaggatcctaccctcgactctccctcagcttcaagttg
aagaggaacatcggctacttcatcctgcagacctacatgccctctatcctgatcaccatc
ctttcctgggtctccttctggatcaactatgacgcttccgctgccagagttgctttggga
atcaccactgtgctgaccatgaccaccatcaacactcacctgcgggagacccttcccaag
atcccctacgtcaaggccattgacatgtaccttatgggttgctttgtgttcgtcttcctg
gccctactggagtatgccttggtcaactacatcttcttcggcagaggaccccagcgccag
aagagagcagctgagaaagaagctgtcgccaacaacgagaaaatgagaatggatccaaac
aagtggttggtgggaaatgtagttcagagagacgacactctgtatgccagaatgaaacag
agggatattgacgctcatgactcgatgtgggaaccaatctttgtggacgatgcagcgata
ggactaggcgaggaaaagaataaggcttctgatcatattcctgtttttcatccattcatc
tag
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