Coregonus clupeaformis (lake whitefish): 121579234
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Entry
121579234 CDS
T08357
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04520
Adherens junction
cclu04916
Melanogenesis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121579234
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121579234
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121579234
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121579234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579234
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121579234
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121579234
NCBI-ProteinID:
XP_041749574
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All DBs
Position
13:31124856..31191942
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AA seq
506 aa
AA seq
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MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
MPPSGKQDHHDYYDRNMYVKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRECAGEK
SKADWGKKKRRKREKHQDSSTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGRC
ASPTSSDGSAIDSALSPVDGVPPQHPSSPLPASPSHVPLQSQPSKHTPCILSKSKTTELS
LKALIESSQQHDNLHHHHDCTLPKSH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggtggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagtccgaacgca
gcggcggtcagacggggtcagcaaaacgaacatagaggttatcaagagaaacaccgggag
catctcgacagcgtgtccaaacatcaagatggaggaatgtacaaaacagcgtatccaggg
tacccgtttctcatgctgcccgacccatacatccccaatggatcagtgtcaccatcttcc
aacaaagtttcagtggtccagcagtctcacgggatgcaccccctgacgtccctcctgccc
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaa
ggcgttcacaggccccagtcccaggatatctcaggcttctactccctaccccctggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcttccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctggggccaggcatgcaccccacagggatcccccacccagccatc
atgcccccttcagggaaacaggaccatcacgactattacgacaggaacatgtacgttaag
cctcaccaggagcccaagcgggagaaggagcctaagaagccggtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcaccctg
aaagagagcgctgccatcaaccagatactgggtagaaggtggcacgccctgacccgggag
gagcaggccaagtactatgagctggccagaaaggaacggcagctacatatgcagctctac
cccagctggtccgccagagacaactacgatgcaggccttagagagtgcgcgggggaaaag
agtaaagctgattggggcaagaagaagagaagaaaaagagagaagcatcaggactcctcc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacagac
tggtgcggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggacggtgc
gccagccccacttcttccgatggaagcgctatagactcggccctctcccctgttgacggc
gtcccccctcagcaccccagctctcccttgcctgcttccccctcgcacgtccccctgcaa
tcccagcccagcaaacacacaccctgtatcctctcaaaatccaagaccacagaactgtct
ctcaaagctttaatagaatcatcccaacagcacgacaatctccatcatcatcatgactgt
accctgcccaagtctcactag
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