Coregonus clupeaformis (lake whitefish): 121579260
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Entry
121579260 CDS
T08357
Name
(RefSeq) transforming growth factor beta activator LRRC32 isoform X1
KO
K26316
transforming growth factor beta activator LRRC32
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121579260
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
121579260
NCBI-ProteinID:
XP_041749640
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Position
13
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AA seq
681 aa
AA seq
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MCALSLCHSTMAAYLWLVLAIVSDVAASLLHPPRQLAPCQMVQNDVYCNDLNLRTVPAKL
PHGIQKLDLSRNLLQNLTQEVLAIYNTVHHLNLHSNKIQFIQPGLFKYMTNLQVLDLSSN
YLDVFAVSKTSIGPLTAVERLDLSGNGLYTGMTDFFLSEAPALMNLSLNGNSITKVGKET
FCGSLALRNIDLHNNVILEIEDGAFDSLLHLSELDLSINSITCITDFNLSKLKVLNLSKN
SMECFQTTDSDLEYKLLYLDLRENKIHYFPVLPRRNKLMYLDLSRNRLMSVNTTGPADEL
EHFRDTFVPHTQSGGMSRHQDFSRLMYLDMSYNQIRSIPPSFFCSMVSLEHLNVSNNCIG
AFSIDQESPLNSLKTLDLSYNALQNLSFGENTLRSLQELFLQGNFLSIMDSGMFQRLPSI
RGLHLQQNYLKVCPSQRKSPQTDHNSQDPPSCVSFASIPSLHFLYLSGNSLEVLPPYAFN
GTPLRLLDLSLNPGLDVQQNAFSSLETSLTHLSLRENHIPELNTDLSLLSSLKFVDLSTN
KLTTLPLWNKESSIESLNLQNNNLVTLEYNTVLVLERTLKTLYMGSNPLSCCSNPRFLDM
LQRSEVVVPDIATVTCQYTENSVPVEVNIGSVTQEQCQKLDSKSVSIIVIMVTALVLITV
LVVLSKVCHPRRRKLNISFRA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctctctctctgtgtcacagcaccatggcagcctacctctggctggtcctggcc
atcgtcagtgatgtggcagcatccttgttacatcccccacgccagctcgccccctgccaa
atggtccagaatgacgtgtactgcaacgatctgaacctgaggaccgttccagccaagctt
cctcatggcattcaaaagctggacctgtctcgtaaccttctacaaaaccttactcaagag
gttctagcaatctacaacaccgttcatcatctgaacctccactccaacaagatccagttc
atccagccgggtctgttcaaatacatgaccaatctacaagtgctggacctctccagtaat
tacttggatgtttttgctgtttcgaaaaccagcattggacctcttacggctgtggagagg
cttgacctctcaggcaatggcctgtacacggggatgaccgacttctttctcagtgaagcc
ccagcactaatgaacctttctctgaatggcaacagtatcaccaaagtgggcaaggagacc
ttttgtggatctttggccttgagaaacattgaccttcacaacaacgtcatcttagagatt
gaggacggagcatttgactcgttgctccatctgtccgagcttgatttgtccattaactcc
atcacttgcatcactgactttaacctttccaaactcaaggtgctgaacctcagtaagaac
agcatggagtgcttccaaaccacagattcagacctagagtacaagctcctctacctcgac
ctgagggaaaacaagatccactactttcccgttctccccagaaggaacaagctcatgtac
ctggatttgtccaggaatcgcctgatgagtgtcaataccacaggaccagctgatgagctc
gagcacttcagagacacgttcgtacctcacacacagtcaggtggaatgagcagacaccag
gacttctcaaggctcatgtacctcgacatgagctacaaccagataaggagcataccgccg
tctttcttttgcagcatggtgtcccttgagcatcttaacgtcagtaataactgtatcggg
gccttttctatagaccaggagagccctctgaactctctgaagaccctggacctgagttac
aatgccctacaaaacctctcgtttggggagaacaccctacggtcactgcaggaactcttc
ttacaagggaactttctcagcataatggactctggaatgttccaaagactgcccagcatc
agaggccttcacctccagcagaactacctgaaagtctgcccttcacagcgaaaatcaccc
cagacagaccacaactcccaggatcctccaagctgtgtctcctttgcatcaataccaagc
ctgcacttcttgtacctttctggaaacagtcttgaagttctgccaccatatgccttcaat
ggcactccactcaggttgctggacctgtccctaaacccaggcttggacgttcaacagaat
gctttctctagtctggagacctccctaactcatctctcattgagagaaaaccacatccca
gaattgaacactgacctttccctgctaagtagtctcaaatttgtggacctgtccaccaac
aagctgaccactctccccctttggaacaaggagtcctccatcgagtccctgaacctgcag
aacaacaatctggtgaccctggagtacaacacagtcctggtcctggagcggacgctcaaa
accctctacatgggctcgaaccctctcagttgctgcagcaacccccgcttcctcgatatg
ctccaacgctccgaagtggtcgtcccggacatcgcgacagtaacctgccagtacaccgag
aactcggtgccagtggaggtgaacattgggagcgtgacgcaagagcagtgtcagaagctg
gacagtaagagcgtgagcattatcgtcatcatggtgacagctttggtgctgatcacggtg
ctggtggtgctatccaaggtgtgccaccccagaaggcgcaagctcaacatcagcttcagg
gcctaa
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