Coregonus clupeaformis (lake whitefish): 121579266
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Entry
121579266 CDS
T08357
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121579266 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579266 (dtx2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579266 (dtx2)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121579266 (dtx2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
WWE_5
Motif
Other DBs
NCBI-GeneID:
121579266
NCBI-ProteinID:
XP_041749657
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All DBs
Position
13:1766363..1785877
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AA seq
568 aa
AA seq
DB search
MATASSSCVGINGSRNGPSISTPTLGAPGQSQPMVVVWEWQDDLGSWRPYSGQVSGYIEQ
YFSSPRGHRGGGPGTTSISLGQSDPSLSPYLIDIPSLNQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWANDEGGWTPYETRTSILLEHSYLARQATADMASHGYNYIVDLTALAQVNKA
TGFRRQVRRQGNFPYPLASGASVIHSGPACSCHQCLSHSCTGPMPSRSRHSFSSGQLSLP
SFQGPSRAAGAHPTSVYSPYPRRPLSVGGMAWGGPWPPSTSASQFPGTPLSYPTSANGLS
VPTIPLQRNGSTSVSSALAAPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYAVV
SEGAKSIPPGAVGKFTKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGK
MEIYSIAQSLPGHPDCGTIQIIYSIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRK
VLELLKVAWTRRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLS
ELSSQGVTADCLVKQEGPSQGGASNSGL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgtgtggggataaatgggtctagaaatggaccctctatc
tctacaccgaccttgggagcacctggacaatctcagcctatggtcgttgtatgggaatgg
caggatgatcttggctcctggcgaccatacagcggccaggtgagcggctacatcgaacaa
tacttctcctctccgcggggacacagaggtgggggtcctggcaccaccagcatcagcctc
ggacaatcagaccccagcttgtcgccttatctcatagacataccaagcttgaaccagttc
cgccaagatacagggaaaacgcggtctgtacgccgccaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggcgaatgacgaaggaggatggactccatacgag
actcgcacttctatcctactagaacacagctacctggcacggcaggccacggcggacatg
gcctcacatggctataactacatagtggacctcacagcgctggcccaggtcaacaaggcc
acaggcttcaggcggcaggtccgacggcagggtaacttcccctacccgctggcgtctggc
gcctccgtcatccactcgggcccggcctgctcctgccaccagtgtctgagccacagttgc
actggccccatgcccagccgctcacgccactccttctcctctggccagctgagcctgccc
agcttccagggccccagcagggcggctggagctcaccccacctcggtgtactcgccctac
cccaggaggcctctttctgtggggggcatggcgtggggtggcccttggcccccgtcaacc
tccgctagtcagttccctggaactccactgtcctaccccaccagtgccaatggcttaagt
gtccccaccatccctctgcaacggaatggatccaccagtgtgagctcagcccttgcagcc
ccagcccagaaaccagaggatgtcattcaccgctacatggaggaagtggcctctgctcaa
gacgaggactgcatcatctgtatggaccggctgtcgtgtccgtcggattatgctgtggtg
tccgagggagccaagtccatcccgcccggcgccgtgggcaagttcaccaagtgtggacac
accttgcacatgctctgcatgctggccatgtacaacaatggaaccaaggatggcagcctc
cagtgcccctcatgcaagacgatctacggcgagaagactgggacccagcccaagggcaag
atggagatctatagtattgcccagtccctccccggccacccagactgtggaactatccag
ataatttacagcataccccctgggatacagggtccagagcaccctaacccggggcagcca
tacacctgtagaggcttccctcgcttctgcttcctcccagacaacgacaagggcagaaag
gtacttgagctgctgaaggtagcgtggacacggcgcctcatcttcacagtgggcacgtct
agcaccacgggcgagcctgacacagtggtgtggaacgagatccaccacaagacggagatg
atgtccaacgtgtcaggccacggctacccggaccccaactatctggacaatgtgctgtcc
gagctgtcctctcagggggtgaccgccgactgcctggtcaaacaggagggccccagccag
ggaggagcgtcaaactctggactgtga
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