Coregonus clupeaformis (lake whitefish): 121579284
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Entry
121579284 CDS
T08357
Symbol
slc8a2a
Name
(RefSeq) sodium/calcium exchanger 2a
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121579284 (slc8a2a)
04020 Calcium signaling pathway
121579284 (slc8a2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121579284 (slc8a2a)
04261 Adrenergic signaling in cardiomyocytes
121579284 (slc8a2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121579284 (slc8a2a)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121579284 (slc8a2a)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
121579284 (slc8a2a)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121579284 (slc8a2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121579284
NCBI-ProteinID:
XP_041749683
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Position
13:5680072..5703185
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AA seq
937 aa
AA seq
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MGAHPVYPPLPSFLLLLSILLLLPHPATSSSHSKPQVVERASVSGTPSPPSGNSTGGKRA
CTDKVMCRPGIVLPVWLPLSPPLAEQTGRAIVYFACLMYMFLGVSIIADRFMASIEVITS
QEKEVTITKPNGETSVTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFDAGELGP
GTIVGSAAFNMFVIIGVCVWVIPDGESRKIKHLRVFFITAFWSIFAYIWLYLILAVISPG
VVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMHKRYRADKRHGIVVETEGDLAPKGID
VIMDAKFSDGNSTAGNSSSVCTVSVQTGKELDQNRDEVVRILKDLKQKHPDKDLEQLIEM
ANYSALVQQRKSRAFYRIQATRMMIGAGNVLKKHAAEHTRRKAAAMEGGAPEKDDRATCA
HLSFERAQYQCTENCGTLSLAVICEGGMGQHTFYVDYHTENGSANAGADYEFSEGTLVFK
PGESRKEIKVGILDDDVFEEDEHFFVRLQNLRLDEGGNEVSPGTPPKGRLVEPLVAMVTI
LDDDHAGIFTFGERVLRVSESSGTMVVTVVRNSGSRGTVMLPYRTEDGSARAGVDYEETK
GELEFSNEQTSQTLQVRIVNVEEYEKQENFFIVLEEPKWLKRGISALLLNQGNPTPEEED
ARRISEMGKPILGEHSRLEVIIEESYEFKSTVDKLLKDTNLAVVIGTHSWREQFIEAVTV
SSGGDEEDGVERRLPNCFDYFMHIVTVFWKILFACVPPTEYWNGWACFVVSIIVIGLLTT
VIGDLASHFGCTVGLKDSVTAVVFVALGTSIPDTFASKVAATQDQYADASVGNVTGSNAV
NVFLGIGVAWSIAAIYWETKGQAFRVDPGSLAFSVTLFTIFAFINMGVLMLRRRPSVGGE
LGGPKVTKVLTTLFFFGLWFIYILFSSLEAYCHVKGF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggagcccaccctgtgtatcccccactcccatccttcctcctcctcctctccatcctc
ctcctcctgccccacccggccacctcttcctcccactccaagcctcaggtggtggagcgg
gcatctgtatcaggcaccccatctcccccctctggtaacagcacagggggcaagcgggcg
tgcacggacaaggtgatgtgtagacctggcatcgtgctacctgtgtggctgccactcagc
cctccactggcggagcagacggggagggcgatagtctacttcgcctgcctcatgtacatg
ttcctgggcgtgtccatcatcgccgatcgcttcatggcctccatcgaggtcatcacctcc
caggagaaagaggtgactatcaccaaacccaacggggagacgtcagtgaccactgtgcgg
atctggaacgagactgtgtccaacctcacgctcatggccttgggctcctctgcaccagag
atccttctctctgtcatcgaggtgtgtgggcacaactttgacgcgggggagcttggacca
ggcaccatcgtgggtagcgctgccttcaacatgtttgtgatcatcggagtgtgtgtgtgg
gtcatccccgacggggagtcgcgaaagatcaaacatctgcgagtgttcttcatcacagcc
ttctggagcatcttcgcctacatctggctctaccttatcctagccgttatctcccctgga
gtagtggaggtatgggaggctctggtcactctgctttatttccctgtgtgtgtcatcttg
gcttggatcgccgaccgccgcctgctcttctacaagtacatgcataagcgttaccgtgcc
gacaagcggcatggcatcgttgtggaaacggaaggtgacctggcgcccaaggggatcgat
gtaatcatggacgctaagttctcggatggcaattccacagctggaaactcctccagtgtc
tgcacagtctctgttcagactggcaaggagctggaccagaacagagatgaggtggtacgc
atcctgaaggacctgaaacagaagcacccggacaaagacctggagcagctgatcgagatg
gccaactactcagccctggtgcagcagaggaagagccgcgccttctaccgcatccaagcc
acacgcatgatgatcggtgccggcaacgtgctcaagaagcatgccgccgagcacacgcga
cgcaaagccgccgctatggagggcggagccccggagaaagacgacagggccacgtgcgcc
cacctgtcctttgagcgtgcccagtaccagtgcacggagaactgtggcaccctgagccta
gcggtgatctgtgagggtggcatggggcagcacaccttctatgtggactaccacacagag
aatggctcggcaaacgccggggcggactatgagtttagcgaggggacgctggtgttcaaa
ccaggggagagccggaaggagattaaggtgggcatcttggacgacgacgtctttgaggaa
gacgagcatttctttgtgcggctgcagaacctccgtctggatgagggcggcaacgaagtc
tcaccgggaacgccgcccaagggccggctggtggagccgttagtcgccatggttaccatt
ctggacgacgaccacgctggcatcttcacgttcggcgagcgcgtgctgcgagtgagcgag
agctcgggtacgatggtggtgaccgtggtgcggaactcgggctcgcggggcaccgtgatg
ctgccctaccgcactgaggacggcagcgcccgtgccggcgtggactacgaggagaccaag
ggcgagcttgagttctccaacgaacagaccagtcagactctacaggtacgcattgtaaat
gtggaggaatatgagaagcaggaaaacttcttcattgtgctggaagagcccaaatggcta
aagcgaggaatctcagctctgctgctcaaccaggggaaccctactccagaagaggaggac
gccaggcgtatctcagagatggggaagcccattctaggggagcacagcaggctagaggtc
atcatagaggagtcctacgagtttaagagcaccgtggacaaactcttgaaggacaccaat
ctggccgtggtgattggaactcattcctggagagaacagttcattgaggcggtcacagtc
agttcaggaggtgacgaggaagatggagtagagcggcgactgcccaactgctttgactac
ttcatgcacattgtgacggtattctggaagattctatttgcctgcgtgccgcctaccgag
tactggaacggctgggcctgctttgtggtgtccatcattgtcatcggcttactaaccacc
gtcatcggggacctggcctcccacttcggctgcaccgtgggcctcaaagacagtgtcact
gctgtggtgtttgtggctctgggcacctccatccctgacacctttgccagtaaagtcgct
gccacccaggaccagtatgccgacgcgtcggtgggcaacgtgacaggtagcaatgcggtc
aacgttttcctgggcatcggggtggcgtggtccatcgctgccatctactgggagaccaaa
ggtcaagctttccgcgtggaccccggctccctggccttctcggtcacgctcttcaccatc
ttcgccttcatcaacatgggggtgctgatgctccgccgccggccgtctgtagggggtgag
ctggggggccccaaggtcaccaaggtgctcaccaccctgttcttctttggcctctggttc
atctacatcctcttttccagcctggaggcctactgccatgtaaagggcttctga
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