Coregonus clupeaformis (lake whitefish): 121579289
Help
Entry
121579289 CDS
T08357
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121579289
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121579289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Bacteroid_pep
Motif
Other DBs
NCBI-GeneID:
121579289
NCBI-ProteinID:
XP_041749688
LinkDB
All DBs
Position
13:34173584..34185772
Genome browser
AA seq
558 aa
AA seq
DB search
MAAAAGRYYNEGGRATKRQKTEDGMTTEGYDDPHKTLPSPVVHIRGLVDGIMEADLVEAL
QEFGTISYVVMMPKKRQALVEYEDLNGSCNAVTYAAENQVYIAGHPSFINYSTSQKISRP
GDPDDSRSVNNVLLLTIMNPIYPITSDVLYTVCNNCGPVQRIVIFRKNGVQAMVEFDSVQ
SAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQDADAEGNWN
NSQDPNANPNKRVRQPALLGDHPPEYGGPTGGYHGYHDESGYGPPPHYEGGRRMGPLMGG
RGRGRGGSYGGPGYGHGPPPPGDYSAHADSPVVMVYGLEPAKINADKVFNVFCLYGNVER
VKFMKSKPGAAMVEMGDCYAVDRAISHLNNNFLFEQKLNVCVSKQQAIMPGQSYELEDGS
SSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNGQPDISVEVFNGVCEELGVKNPSN
IKLFTGKSGATGERSSSGLLEWESINDAMEALAMMNHYQMKNPSKYSDCDNNTTANDTNG
GPYPYTLKLCFSTAQHAN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcagcaggtcgctactacaacgagggtggcagagcaacgaaaagacagaaa
accgaagacgggatgacgacggagggctatgatgacccccataaaacgctcccttccccg
gtggtccacatcaggggccttgttgatggtatcatggaggcagatctagtggaagccctg
caggagttcgggacaatcagttatgtggtcatgatgcccaagaagcgccaggccctggtg
gagtacgaggacttgaatggatcctgcaatgctgtgacctacgcagctgagaaccaggtc
tacatcgctgggcacccctccttcataaactactccaccagccagaagatctcccggccc
ggagacccagacgactcacgcagcgtcaataacgtgctgctgctcaccatcatgaaccct
atctaccccatcacctcggatgtgctgtacaccgtctgtaacaactgtgggcctgtgcaa
aggatcgtcatcttcaggaagaatggagttcaggccatggtggaatttgactctgtgcaa
agtgcccagagggcgaaagcctctctaaatggggcagacatctactctggctgctgcaca
ctgaagattgagtacgccaagccaacccgcctcaacgtgttcaagaatgaccaggacacc
tgggactacacaaaccccaacctgagtggccaagatgctgacgctgaaggcaattggaac
aattcacaagatcccaatgccaaccccaacaagcgtgtgagacagccagctctactagga
gaccatcctccagagtatggcggcccaaccggtgggtatcacggctaccatgatgaaagc
ggctacggaccccctccacactatgagggtgggcgccgcatggggcctctgatgggaggg
cgtggccgcggacgtggcggcagttacgggggacctgggtatggacatggcccacctccc
cctggtgactacagcgcccacgctgactcccctgttgtcatggtgtacggcctggagccc
gcgaagatcaacgccgacaaggtcttcaacgtcttctgtctctatggcaacgtggagcgg
gtgaagttcatgaagagtaagccaggggcggccatggtggagatgggcgactgctacgct
gtggaccgtgccatcagccacctcaacaacaacttcctgtttgaacagaagctcaacgtc
tgtgtgtccaagcagcaggccatcatgccaggtcagtcctacgagctggaggatggctcc
agcagcttcaaggacttccacggctcccgcaacaaccgcttcacctccccggagcaggcg
gccaagaaccgcattcagcaccccagcaacgtcctacacttcttcaacgggcagcccgac
atctccgtggaggtcttcaacggggtctgtgaggaacttggtgttaagaacccatctaac
atcaaactcttcaccggaaagagtggcgcgacaggtgagcggagctcatccgggctgctg
gagtgggaatctataaacgacgccatggaggctctggccatgatgaaccactaccagatg
aagaaccccagtaagtactcagactgcgataacaacaccacagctaatgataccaacggt
ggtccatacccctacacactgaagctgtgtttctcaaccgcgcagcatgccaactag
DBGET
integrated database retrieval system
