Coregonus clupeaformis (lake whitefish): 121579291
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Entry
121579291 CDS
T08357
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579291
04121 Ubiquitin system [BR:
cclu04121
]
121579291
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121579291
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Atypical E3
121579291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121579291
NCBI-ProteinID:
XP_041749696
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All DBs
Position
13:34219427..34222729
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AA seq
596 aa
AA seq
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MSSASQASSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKSS
HGVLDGRSPGPQQGKPSSGGPMEGGRQHAERLDRGRGEYGVSPRLPNGLHRAEDVSMSEG
SRQSPNTRRAMAGAVPALHGTIPHALIAQGLVGPPHGLLAPVLGTRAGGPQMAGSSGPIM
GDVGRRQVGSAMSLGAGASALVGLEAGWRNGEVMAELAESARSRAEGWPNRPKVVREVLV
TLCGCAPFSVRFRKDHNLVGRILAFEAGAGPEFELKVFVEYPSGSGIVFSGITELVRQMF
RDSNKDAGKAVNSGLRYVEYERRQGAGDWRALTELLSDGVRSFKEPPMPEVLPQSYADSG
MPMAPAGRSAPPKGAARRRKASPGSENGESEGRPMGDHPARDPWPRGAYPGMEPLGTGMP
NPQDGPPRSHSQPSPISALMGVADSLSSNQMSRDGPGMSSAHSSASGRPTSGSPSSASAA
VSQAVMGQGAQGGPSTTSAGESGSGTPGALLCCTLCRERLEDTHFVQCPSVPHHKFCFPC
TRGSIRSQGPGGEVYCPSGERCPLAGSTVPWAFMQGEISTILAGDGDVTVKKENDP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcctcgcaggcatcctctaggcggcaatggtgctatctctgcgatctgccc
aagatgccctgggccatgctctgggaattcagcgaagctgtttgccggggatgcgtgaac
tacgacggggcagacagaatcgagcttctaattgagacggccaggcagttgaagagcagc
cacggtgttttggacggaaggtcccctggccctcagcaaggcaaacccagctcaggtggg
ccaatggaaggagggaggcagcacgcagagcgtttagacaggggtaggggagagtatgga
gtttccccccgcctccccaacggtctgcacagagctgaggatgtgagtatgtcagagggg
agcaggcagagccccaacaccagacgggctatggctggggctgtacctgctctacatggg
acaatacctcatgctttgatagcccaggggttagtggggccccctcacggcttgttggcc
cctgttttaggcaccagggctgggggcccacagatggctggctcctctggccctataatg
ggtgatgttggcaggcgtcaggtagggtcagccatgtcgctgggagctggcgcctctgct
ctggtgggtctggaagcaggctggaggaatggggaggtcatggctgagctagcggagagc
gccaggagccgggcagaaggctggcccaaccgccccaaagtggtacgagaagtcctggtg
accctctgtggctgtgcccccttcagcgtgcgcttcaggaaagaccacaacttggtgggg
cgcatcctcgcttttgaagccggtgctgggcctgagtttgagctgaaggtgtttgtggag
taccccagcggctctggaatagtcttctctggcatcacggagctggtcaggcagatgttc
cgcgactctaacaaagatgcaggcaaagcagtgaactctgggctgcgctacgtggaatac
gagagacggcagggcgccggggactggcgtgcactcactgagctcctgagcgacggcgtg
cgttcatttaaggagccaccgatgcccgaggtccttccacagtcgtacgcagacagcggc
atgccaatggcgcctgccggccgctctgcacctccaaagggcgctgcacggcgacgcaaa
gcatccccgggctcagaaaacggagagagtgaaggaaggcccatgggggatcacccagcc
agggatccctggcctcgaggtgcctatccaggcatggagcccctgggcacaggcatgccc
aacccccaggacggcccgccccgctcccacagccagccctcacccatctcggcgctcatg
ggagtggccgacagcctgagctccaaccaaatgtcccgagatggccccggcatgtcctcg
gcccactcctccgcatctggccgcccaaccagcggtagtccctcttcagcctctgccgca
gtctcccaggcagttatgggccagggtgcccaagggggacctagcaccaccagcgccggg
gagtccgggagcggcaccccaggtgccctgctctgctgcaccctctgccgagagcgtctg
gaggacactcattttgtccagtgtccatctgtcccgcaccacaagttctgcttcccatgc
acgcgcggctccattcgcagtcagggccctggaggagaggtgtactgccccagcggcgag
cgctgccctctggctggatccaccgtgccctgggccttcatgcagggagagatctccacc
atccttgccggagacggagacgtgacggtaaagaaagagaacgacccctga
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