Coregonus clupeaformis (lake whitefish): 121579301
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Entry
121579301 CDS
T08357
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu04010
MAPK signaling pathway
cclu04141
Protein processing in endoplasmic reticulum
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121579301
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121579301
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121579301
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121579301
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121579301
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121579301
03009 Ribosome biogenesis [BR:
cclu03009
]
121579301
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121579301
04131 Membrane trafficking [BR:
cclu04131
]
121579301
03051 Proteasome [BR:
cclu03051
]
121579301
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121579301
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121579301
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121579301
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Prp19 complex
121579301
Complex C
Prp19-CDC5 complex
121579301
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121579301
Chaperones and folding catalysts [BR:
cclu03110
]
Heat shock proteins
HSP70 / DNAK
121579301
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121579301
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121579301
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121579301
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121579301
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121579301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Ppx-GppA
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
121579301
NCBI-ProteinID:
XP_041749713
LinkDB
All DBs
Position
13:34650760..34655492
Genome browser
AA seq
647 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA
MNPCNTVFDAKRLIGRRFDDGVVQSDMKHWPFEVINDSTRPKLQVEYKGETKSFYPEEIS
SMVLVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
RFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKN
SLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELE
KVCNPIITKLYQGAGGMPEGMAGGFPGAGGAAPGGSGSSGPTIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcctgcagtcggcattgatctcgggaccacctactcctgcgtgggtgtg
ttccagcatggcaaggttgaaatcattgccaacgaccagggtaacaggaccactccaagc
tacgttgccttcacagactcagagaggctcattggtgatgccgccaagaatcaggttgcc
atgaacccctgcaacacagtatttgatgccaagagactgattggccgcaggtttgatgat
ggagttgttcaatcggatatgaagcattggccgttcgaagtgatcaatgattctactcga
ccaaagctccaagttgaatacaaaggagagactaagtcattctacccagaagaaatttcc
tccatggttctggtcaagatgaaggagattgcagaagcctaccttggaaaaactgtcaac
aatgcagttgttaccgtgcctgcttacttcaacgactcccagcgccaggcaaccaaagat
gctggcaccatctcaggcctgaatgtactgcgtatcatcaatgagccaactgctgctgcc
attgcctacggcttggataagaaggttggtgctgaaaggaatgtcctgatctttgatctt
ggtggcggcacttttgatgtgtccatcctgaccatcgaggatggcatctttgaggtcaag
tccactgctggagacacccatctgggtggagaagactttgacaaccgcatggtcaaccac
ttcattgcagagttcaaaaggaagtacaagaaagatatcagtgacaacaagagagctgtt
cgccgtctccgcaccgcctgtgagagggcaaagcgcaccctgtcctccagcacccaggcc
agcatcgagattgactctctgtacgagggaatcgacttctacacctccatcaccagagct
cgctttgaggaactcaatgcagaccttttccgtggcaccctggacccagtggagaaatcc
ctccgcgacgccaagatggacaaggcccaggtccacgacatcgtcctggtcggaggctcc
actcgtatccccaagatccagaaactgctccaagatttcttcaacggcaaagagctcaac
aagagcatcaaccccgacgaggctgtggcctatggcgcagctgtccaggcagccatcctc
tcaggtgacaagtctgagaatgtccaggatctgcttctgctggacgtcaccccactgtcc
ctaggtattgagaccgctggaggtgtcatgaccgtcctgatcaaacggaacaccaccatc
ccaaccaagcagacccagaccttcaccacctactcagacaaccagcccggtgtgctcatt
caggtgtacgagggtgagagggctatgaccaaagacaacaacctgttgggcaagtttgag
ctgactggaatcccccctgcacctcgcggtgttcctcagattgaggtcaccttcgacatt
gatgctaatggcatcatgaacgtgtctgcagctgacaagagcactggcaaggagaacaag
atcaccatcaccaacgacaagggtcgtctgagcaaggaggacattgagcgcatggtccag
gaggctgagaagtacaagtgtgaggatgatgtgcagcgtgacaaggtttcctccaagaac
tcactggagtcctatgctttcaacatgaagtctactgtggaggatgagaaactgcagggc
aagatcagtgatgaggataagaccaagattctggagaagtgcaacgaggtcatcggttgg
cttgacaagaaccagactgctgagaaggaagagtatgaacaccaccagaaggagctggag
aaggtttgcaacccaataatcaccaagttgtaccagggtgctggtggtatgcccgaaggc
atggctggtggattccccggagctggtggcgctgctcctggaggcagtggatcatctgga
ccaactattgaggaagtcgactaa
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