Coregonus clupeaformis (lake whitefish): 121579322
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Entry
121579322 CDS
T08357
Name
(RefSeq) protein turtle homolog B-like
KO
K22656
immunoglobulin superfamily member 9B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121579322
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
IGSF9
121579322
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set_2
Ig_4
Ig_DSCAM-DSCAML_C
C2-set_3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121579322
NCBI-ProteinID:
XP_041749747
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Position
13:13632273..13854367
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AA seq
1479 aa
AA seq
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MIWYVATLIASVFSTRGTAAQGAHGVREEPQFVTARAGENIILGCDVAHPLNGQPYVVEW
FKFGVPIPFFINFRFHPPHVDPEYAGRASLHGKSSLRIEKVRSDDQGWYECKVLMLEQQY
NTFHNGSWVHLTVNAPPNFTDTPPLYVEAKEGGSITLSCVASGNPKPSINWLREGEPVED
SNKYKVSDGSLTVLLVSREDRGAYTCRAYSIQGEVVHTTRLLVQGPPFIVSPPQNLTVNI
SQAAKLDCLAEAYPGNLTYTWFWEDDNVFFKNGLRDRVSILVDGSLIIGSVKPEDAGRFT
CSPSNSLGRPPSASAQLTVQYPARVKDMPPAIYVAIGLPGFIRCSVDANPPATLVKWTKD
GNPLRIEKYPGWSQMEDGSIRVTEVTDDSLGTYTCMPYNALGSEGWSDPTPLVLKDPPKF
SIVPGGEYRQEAGRELVIPCAADGEFPYPNITWRKVGKPSKSKHNVLPSGSLQFKSLSKE
DHGEWECVATNVATSITASTHLLVIGTSPHAPANVHAAVSTTWANVSWEAGYDGGFEQTL
SVWVKREQLGPHDWLSMLVPSGQTWLVVPGLEPQTAYQFSVLAQNKLGTGPFSEVVTVNT
LVFPISTPEPLVLLTSPRCLIANRTQQGVLLMWIPPANHTAPIERYVMEFRLGERWDVLD
DAIPAGETELLARDLIQEAWYEFRVMAVMEELVSEPSNTVGVSSTDFFPPPEMVDEGGLA
RPVVAGIVATICFLAAAVLFSTLAACFVNKQRRRKLKRRRDPPLSITHCRKSVETPTPLS
PLPGIEPYCEGPDASSYQPPPSSPQSSSGKVSPESMRSMGPPSECSEDGNGMSMKKIPPS
PAKKEELSLYKKTKRAITSKKYSVSKYEAEATTPIELISRGPDGRFVMDPSDMEMISVKP
RRIEGFPFVEESDRYPEFRQSDEENDDPGPMPPVMATLRPHQLSPISSQESYLQPPAYSP
RFQRPMEGMTIMESSRLQAMGQIQGSLHHRAFPHSHGHFYGYLGSPGEPDPPPPFYMLDT
SPLSSVMSSPPYHPEGPFGHPHIPEEMGEGDIHHYAVSSFPLPLTLTSSSRSPEIWHRPD
FPFASLERPHFIFPPHHPLHLHREPFFPPPHVLPPVVLQPSSLQVPSYSGVLQLEAPKSR
PGKSPSKVKPQGLPAKHLAMQEAQSLGKLRHTSHSMGVPVLPYPDPTALMGGPSTFSSLD
TRWFEPTPRLSPRQARRMEPSMMVLQPSRLSPLTQSPLSSHEGSPEIVVRPRPRPSFVQP
SIPPEMSEITLLPPSSVSFSRSSSPSSSPAHGQVSRRASPSYRSHMAFATSVTSYPSQSP
SPPMESSNMFGQIPSDPIGQIPSQRRTEEEVLPSEPSPPQLSASGNRRGEPIAPAGSERF
DALRYQRIKKAKKIMVVNNNNSKSRRNTGVSTSQTQQDYTSQGLHAEEALYLRKKKKRPV
RQDPYARFSALLYRRPPREDQKAILASMDNMDPDHVTLL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgatttggtatgtggccactttgatagcaagtgtattcagcacccgaggaacggcagct
caaggtgcccacggcgtgcgagaggagccccagtttgtgacggcgcgcgctggagagaac
atcatcttgggatgcgacgtggcccaccccctgaacggccagccctacgtggtggagtgg
ttcaagttcggagtgcccatccccttcttcatcaacttccgcttccacccgcctcatgtg
gacccagagtacgccggccgagccagtctgcacggcaaatcttctctgcggattgagaag
gtgcgttcagacgaccagggatggtacgagtgtaaggtcctgatgttggagcagcagtac
aacacctttcacaacggcagctgggtgcacctcacagtaaacgctccccccaatttcacg
gacacgccgccactgtacgttgaggccaaggaaggcggcagcatcaccctgagctgcgtt
gcttccggcaaccccaagccctccatcaactggctccgggagggcgagcccgtggaggac
agcaacaagtacaaggtgtctgatgggagtctgacggtgctgttggtcagccgcgaggac
agaggggcatatacctgccgagcctacagcatccagggggaggtggtccacaccacacgc
ctgcttgtccaagggccaccattcatcgtgtcccctccccagaacctgacggtgaacata
tcccaggccgccaagctggactgcctggccgaggcctaccctggcaacctcacctacacc
tggttctgggaggacgacaacgtcttcttcaagaatggcctgagggacagggtcagtatt
ctggtggacggctcgctcatcattggtagtgtgaagccagaggatgctgggagattcacc
tgcagccccagcaacagcctgggccggcccccatccgcctcggcccagctcacagtgcaa
taccctgctcgtgtcaaagacatgccacctgctatctatgtggccatcggcctgccaggc
ttcatccgctgctcggtggacgccaacccgcccgccacgctggtcaagtggaccaaagat
ggcaaccctctccggatagagaagtaccctggttggagccaaatggaggacgggagcatc
cgcgtgactgaggtgacggatgactctctgggcacctacacctgcatgccttacaatgcc
ctgggctccgagggttggtccgatcccactcccctggtgctaaaggatccccccaagttc
tcgattgttcccggaggggagtacaggcaggaggctgggagagagctggtcatcccctgt
gcggctgacggagaatttccctatcccaacatcacatggaggaaggtagggaagcccagc
aaaagcaagcacaatgtcctcccctccggcagcttacagttcaagtccctgagcaaggag
gaccacggggagtgggagtgtgtggccaccaacgtcgccacaagcatcactgccagcacg
cacctcctagttattggcacaagcccccatgccccggccaacgtccacgcggcggtctcc
accacctgggccaacgtgtcatgggaggctggctacgatggcggcttcgagcagacatta
tcagtctgggtgaagagggagcagctgggcccacatgactggctgtctatgctcgtgcct
tctggccagacgtggctggtagtgcccggcctggagccccagacggcctaccagttcagt
gtccttgcgcagaacaagctgggcacgggccccttcagcgaggtcgtcactgtgaacaca
ctagtatttcctataagtacccctgaaccactggtgctgcttacctcaccacgatgcctc
atagccaatcggacgcagcagggcgtcttgctcatgtggatcccgccggccaaccacacg
gctccgattgaacgctacgtcatggagttccgcctgggggagaggtgggatgtcctagac
gatgccatccccgccggagagacagagctgctagccagagacctcattcaggaggcatgg
tatgagttccgggtcatggcggtcatggaggaactggtcagcgagcccagtaacacagta
ggagtgtccagtacagacttcttcccgcccccggaaatggtagatgagggggggctggcg
cggccggtggtggctggcatcgtggccaccatctgtttcctggcggctgctgtcctcttt
agcacactggcagcctgcttcgtcaacaagcagcgccgacgcaagctcaagaggaggaga
gacccccctctctcgataacacattgcagaaaaagcgtggaaactccgactcctcttagc
ccattgcccggcatagagccctactgtgaggggccagacgccagcagctaccagcccccg
ccctccagccctcagtcctcctctggtaaggtgagtccggagagtatgcgttccatggga
ccaccatcagagtgttccgaggacggcaatggcatgagcatgaagaagatccccccgagt
cctgcgaagaaggaagaactctctctgtacaagaaaaccaagcgagcaataacgagcaaa
aagtacagtgtctccaagtatgaagcggaggcaaccacgcctatcgagctgatcagccga
ggccctgacggacgcttcgtcatggaccccagcgacatggagatgatttccgtcaagcca
cggcgaattgagggcttccccttcgtcgaagagtcggaccgctatcccgaattccgccag
tcggatgaggagaacgatgatcccgggcccatgccccccgtcatggcaacccttcgacct
caccaactctcccccatctccagccaggagtcttacctgcagccaccagcctacagcccc
cgcttccagaggcccatggaaggtatgaccatcatggagagcagtcggctccaggccatg
gggcagatccaaggctccctgcaccatagagccttccctcacagccacggtcacttctac
gggtaccttggcagccctggggaacccgaccctccaccccctttctatatgcttgacacc
agccctctgagctctgtcatgtcgtcacccccttatcaccccgaagggccctttggtcac
ccccacatccctgaggagatgggggaaggagatattcatcactatgccgtctcaagcttt
ccccttcccctgacactcacctcttcctctcgctccccggagatctggcacagacccgat
tttccctttgcaagtctggaaaggccccacttcattttcccaccccaccaccctttgcat
ctacaccgggaacccttctttcctcctccccatgttcttccccctgttgttctccagccc
tcctctctccaggtgccatcctactccggtgtcctgcagctggaggccccaaagagccgt
ccaggcaagtctcccagcaaggtcaagcctcagggccttccagccaagcatttagctatg
caagaggcgcagagtctaggcaagctaagacacacaagccacagtatgggtgtgccggtt
ttgccttaccccgacccaacagccctcatgggcggccctagcacattcagtagcctggac
acccggtggttcgagcccaccccccggctcagccccaggcaggctcgtaggatggagcct
agcatgatggtcctccaaccttcccgcctctcacccctcacccagagtccccttagttcc
cacgagggctccccagagattgtagtgcgaccgcgtccccgtcccagcttcgtccagccc
tccatacctccagagatgtccgagatcaccctgcttcccccctcttcagtcagcttctcc
cggagttcctctccctcttcctctcccgcccatggtcaggttagcaggagggcaagtccc
agctaccgctcccacatggcctttgccacctccgtcacaagctacccgtcccagtccccg
tcaccccccatggaaagcagcaacatgtttgggcagatcccaagtgatcccattgggcag
ataccatcccagaggagaactgaggaggaggtcctaccgtccgagccctctccaccccag
ttgtcagcttcaggaaatcgtcgaggtgagccaattgcccctgcggggtctgagaggttt
gatgcattgagataccaacgtattaaaaaggccaagaagataatggtggtcaacaacaac
aactccaagtccagaagaaacacaggtgtctccacctctcagacccagcaggactacacc
tctcagggactccatgccgaagaagctctctacctccgcaagaagaagaaacggccggtc
agacaggacccgtatgcccgcttctccgctctgctgtaccgccgcccgccccgggaggac
cagaaggccattttggccagcatggacaacatggacccagaccatgtcactctcctctga
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