Coregonus clupeaformis (lake whitefish): 121579324
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Entry
121579324 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 32-like isoform X1
KO
K20647
Rho GTPase-activating protein 32
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579324
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121579324
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
SH3_2
SH3_9
SH3_1
PX
RPEL
Motif
Other DBs
NCBI-GeneID:
121579324
NCBI-ProteinID:
XP_045080176
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Position
13:13869261..14135261
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AA seq
1964 aa
AA seq
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MEAGSGSAAAVGSAALGLLGATAAASHDISDRGLRPGRHPEEDDIVPELTRLVYPRERPD
WEETISAMARSAEVPELSAEPLLRSCSSTASMKVKNVKKLSFTKGHFPKLAECAHFHYEN
VDFGTIQLALADEQSEVTRNGFESKELQYLVQIYCQGRSWIVKRSYEDFRVLDKHLHLCI
YDRCFSQLPGLPRFDSLRDRAEAVSQMLMAYLSRLSAIADNKINCGPALTWMEVDNKGNH
LLVHEESSINVPAIAAAHVIKRYIAQAADELSFEVGDIVSVIDMPPKEDTTWWRGKHGFQ
VGFFPSECVELINDKVPQSVTNSVPKPASPCSGLRPASWSLFPPYLEMESVKQDSAWVAD
PLNHYSLSSVSKKHGKLITFLRTFMKSRPTKQKLKQRGILRERVFGCDLGEHLLNSCHDV
PQVLKSCTEFIEKHGVVDGMYRLSGIASNIQKLRHEFDSEQIPDLTKDVYIQDIHCVGSL
CKLYFRELPNPLLTYQLYEKFSEAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLS
HLATFSYITNMHSKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDV
LFSPKLSSLIREGAGHNSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPVTADSKYIE
VGEGPAALQGKFHTVIEFPTERKRPPIKSKKSPVGSWRSFFNLGKSSSMSKRKLHREPNE
LKAMAGGRGDTGTLRSAKSEESLTSLHNVEGESKVYRPRRPRSSSDALSASFNGDLLDCH
TRQHCNSYDNLTQGHSGGPTRDSNGDEGPICVPVLISPPRSAGEDVDLSPPDIGMASLDF
DPMSFQCSLPDCSFSFPLGLSDVATCAAGESTSVKRSQGGVDSGSAPVSPSFLGKFTIPF
LSPDLSPATREKAESKKLTCSMSFPDKPLQAASPIKSKATILAPLAVSEPFAMEFPSKLT
ESHSVTQPSPPPSGLPRDSPPLMGSVLLRTGEPSLSEAFQMELHCKPSAFDTDINTESQD
STGEESTAQQPSATSSQEQPGAVASMESPKASPGPLSSSSVSLLPPLPPQKNSACMLVLA
ESTQQASILTQGSSQSQSPIRPMEPSHSLDWTPPPALCPQTALKEGPRAGAAQNPTLSPT
TPNIAPSSSLPPTTPTDKQPSQSASHQSISTSASAKSPSTPPGASQDIDFTPPASPHHQC
LTTPSSPPAHVSPTRKSPKRQQPAMGQVAVSSTGSSTTTPSSKETGVLPQPAPEVYVNDS
VWSPTLPKPSEQPVAVLQPQPLPQSQPHIQSHPHPQAQPQLQPHPQPNARVAPIPAEQVE
RPWEAIKPVQPRMEPATRHHAHGPTPPVRSIESKLATTVLSHTEAANPTIFHNILAEAST
PEEALTRPPPPPLKSSTHQSAYLYHTKGEAALLEPPGEAYYHQRAIPVGQPSYHYRPDSV
PPHLSYVSKSEPQIPYSARTDHRYNTLAHSRSYHQSMKHRGAPRSGEYISPGLGHRSQVY
GPMEGAPVYPTIRRVHSLHVPSTIRSVPIQRTEVPPDDELLYYQRPVYQCKAYQQQQLPQ
QSLQADYHVTQLQPYFENGRVQYRYGPYSPSANPLDAPYYDVDPYGTIRMRHFHSFSSRD
LGPTLSRSGGKAGGYHYLSRPVLPPGKEQSLFSRDIPPCHSSKGTAFYFAWDPEESGRLQ
MHSSRRESRARQKVRGPVMSQYDNVGLFMPGDLGGYETLHLRSKSDPSKAYGVPLGFQHA
PRASDPDVLMYMETEKHCQGTDTGDKQSRSRTCQASHSHQAQHPPRNQSHQQDPSRHNPA
DGARSFQPRYEWPDPDRHPNMAKTPGGYQEKDDQQQQSAPVKAQAPPKPERSQSVREQQQ
HYSQATMPEPDREYSYQPHGGQQRHSTMTVQSHYDNMDDYHPAAVPQPQALMPNPHGGSS
GSFPTNPGFTGSHSNRAYSTALGQGAFIPAELALQRPETEIHAE
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggaagcgggagtgcagcagcagtggggagtgcagctctagggctgctcgga
gccacggcagcagccagccatgacatctctgacaggggcctgaggccagggcgtcaccca
gaggaggatgacatagtgcctgagctgacccgcctggtctaccccagagagagacctgac
tgggaggagaccatcagtgccatggcgcggagtgccgaggttcccgagctgagcgccgag
cccctcctgcgctcctgcagcagcacggccagcatgaaggtcaagaatgtcaagaaactg
tccttcaccaaaggccacttccccaagctggctgagtgcgcccacttccactacgagaac
gtggactttggcaccatccagttggccctcgcggatgaacagagtgaagtgacacggaat
ggctttgagtccaaggagctgcagtacttggtccagatctactgccagggccgaagctgg
attgtgaagcgcagctatgaggatttccgtgtcctggacaagcacctgcacctttgcatc
tatgaccgctgcttctcgcagctgcctgggctgcctcgattcgacagtctgagggatcgc
gccgaggcagtttcccagatgctgatggcttacctctcccgcctctcagcgatcgctgac
aacaagatcaactgtgggcccgccctcacgtggatggaggttgataacaagggcaaccac
ttactggtccacgaggagtcctccatcaatgtacccgccatcgccgccgcccatgtcatc
aaacgctacatcgcgcaggccgctgacgaactctccttcgaggttggggacattgtgtcg
gttattgacatgccccccaaagaggacaccacatggtggaggggcaagcacggctttcag
gttggcttctttcccagtgagtgtgtggagctgataaacgacaaggtgccgcagtccgtc
accaactctgtgccaaaaccagcatccccctgctctggtctgcggcctgcctcctggagt
ctcttcccaccctatttggagatggagagtgtaaagcaggacagtgcgtgggtggctgac
ccgttaaaccactacagcctgagctcagtgtctaagaagcacgggaaactgatcacgttc
ctgcgcactttcatgaagtccaggcccaccaaacagaagctgaagcagcggggtatcctc
cgggagagggtgtttggctgtgacctgggggagcacctcctcaactcgtgccacgatgtt
ccccaggtactcaagagctgcacagagtttattgagaagcatggcgtggtggacggcatg
taccgcctctctggaatcgcctccaacatccagaaactacggcatgagtttgactcagag
cagatacccgacctgactaaagacgtgtacatccaggacatccactgtgtaggctccctg
tgcaagctctactttcgtgaactgcccaaccccctgctcacctatcagctctacgagaaa
ttctctgaggcagtctccgcagctacagatgaggagcggctcatcaaaatacatgatgtc
atccagcagctgccgccgccgcattacaggactctggagttcctcatgaggcacctgtcc
catctggccaccttcagttacattaccaacatgcacagcaagaacctggccatcgtctgg
gcccccaacctactgaggtccaagcagatagagtcggcctgcttcagcggcacagcagcc
ttcatggaggtccgcatccagtcggtggtggtggagttcatactgaaccatgtagacgtc
ctcttcagccccaagctcagctcactcatacgggagggagcaggacacaactcgttgtcg
cggcccaagtccctgctggtttcatccccctccaccaagctgctgaccctggaggaggcc
caggcccggacccaggcccagatcaactcccccgtcacagccgacagcaagtacattgaa
gtgggggagggcccggcagccctgcagggcaagttccacactgtcatcgagttccctact
gagagaaagaggccccccatcaagtccaaaaagtctccggtgggcagctggcgctccttc
ttcaacctgggcaagtcctcgtccatgtccaagcgcaagctgcaccgcgaacccaacgaa
ctcaaggccatggcaggaggcaggggggacactgggacgctccgatcggccaaaagcgag
gagtcgctcacctcgctacacaacgttgaaggagagtcgaaggtgtaccgtccgcggcgg
ccccgctccagcagcgacgccctctcggcctccttcaatggggacctgctggactgccac
acccggcagcactgcaactcctacgacaacctgacccagggccacagcggaggccccaca
cgcgacagcaacggggacgaggggcccatctgcgtgcccgtcctcatttcgcccccgcgt
tcggccggcgaggacgtggaccttagcccacccgacatcggcatggcctcgttggacttt
gaccccatgtcgttccagtgcagcctgcctgactgctctttctccttccccctggggctg
agtgatgtagccacatgtgcagcgggtgagagcaccagcgtgaagaggagccaaggcggt
gttgacagcggctcggcaccagtctcaccctccttcctggggaagttcaccatccccttc
ctgtcacccgacctcagcccggccacgagagagaaagctgagagcaagaagctgacctgc
tccatgtctttcccagacaaacccttacaggctgcgtccccaataaagtcgaaggcaacc
attttggctcctctggccgtttcagagccgtttgccatggagtttcccagtaagcttaca
gaaagccacagtgttacccagccttccccccctccctcgggacttcccagggactctcct
ccgttaatgggctcagtgctgctgaggacaggggagccgtcgctgagtgaggccttccag
atggagctgcactgtaagccctctgctttcgacactgatatcaacactgagagccaagac
tcaacaggagaggagagcactgcccagcaaccttcagcaaccagtagccaggaacagcca
ggagccgtagctagtatggagtctccaaaggcctcccccggccctctcagcagctcctcc
gtgtccctccttcctcccttgccccctcagaagaactccgcctgcatgctggttctggca
gagtccacccaacaggcctccatcctgacccaggggtcctcccagtcccagtcccccatc
aggcccatggagccctcacactccctggactggacccctcccccagccctgtgcccccag
actgccctcaaggagggacccagagcaggagcagcccaaaacccaaccctaagcccaacc
accccaaacatcgccccttcctcctctctccctcccaccacccctactgacaaacagcca
agccagtcagccagccatcagtccatcagtacgtctgccagtgctaagtccccctccact
cctcccggagccagccaggatatagatttcaccccaccagcatccccccaccaccagtgt
ctcaccactccctccagccctcctgcccatgtgtcccccactcggaagagtccaaagagg
cagcagcccgctatgggccaggtagcggtcagcagcactggatcctccaccaccactccc
agcagcaaggagacaggtgtcctgccacagcctgctcctgaggtctatgtaaatgatagc
gtctggtcgccaactcttccgaaaccctcggagcagccagtggcagttctgcagcctcaa
cctctgcctcaatcacagcctcatatacagtcccatcctcacccgcaggcccagccgcag
ttacagccccatccccagcctaacgccagagtggcccccatcccagccgagcaggtggag
agaccatgggaggccataaagccagtacagccccgcatggagcctgcgacccgccatcat
gcccatgggccaacgcctcccgtccgctctattgagagcaaactggcaaccaccgtcctc
agccacacagaggccgccaaccctaccatcttccacaacatcctggcagaagcctccacg
cctgaagaggccctcacccgtcctccccctcccccgctaaagtcttccacccaccagtca
gcctacctctaccacaccaagggagaggccgccttactggagcctcctggggaggcctac
taccaccaacgggccattcccgtggggcaaccttcataccactaccggccagacagtgtt
cccccacacctctcctacgtctccaagtcggagcctcagataccttacagtgcccgcacg
gaccaccgctacaacaccctggctcactccaggtcctaccaccagtccatgaagcaccgc
ggggcccccaggagtggcgagtacatctcccccggcctgggacaccgcagccaggtctat
ggccccatggagggagccccggtctaccccaccatccgcagagtgcactcgctacatgtg
ccctcaaccatccgttcggtgcccatccagcggaccgaggtgcctccagacgacgagctc
ttgtactaccagcggcccgtctaccagtgcaaggcctatcagcagcagcagctgccgcaa
cagtccttgcaggccgactaccacgtcacccagctccagccttactttgagaacggccgg
gtgcagtaccgttacggcccctattcgcctagcgccaacccgctggacgccccttactac
gacgtggacccctacgggaccatccggatgcggcacttccactcgttcagcagccgggac
ctggggcccaccctcagccggtcggggggcaaggcgggcggctaccactacctgtcccgc
cccgtccttcctccagggaaggagcaaagcttgttcagcagagacatacccccgtgccac
agctccaagggaaccgccttctactttgcttgggaccccgaggagtcgggaaggctccag
atgcactccagccgcagggagagccgggccaggcagaaggtcaggggtcccgtcatgtct
cagtatgacaacgtaggcctgttcatgcctggtgacttgggggggtacgaaaccctacac
ctgcgcagtaagtcagaccccagcaaagcctacggcgtaccgctaggcttccagcacgct
ccccgagcgtcagaccccgacgtcctcatgtacatggagacagagaagcactgtcagggg
accgacactggggacaaacaaagcagatccaggacctgccaggcctcccactcgcaccaa
gcccaacacccaccccgcaaccagtctcatcagcaggaccccagccgacacaacccagcg
gacggagctcggagcttccaaccccgctacgaatggcccgatccagaccggcatccaaac
atggccaaaacccccggtggttaccaggaaaaagacgaccagcaacaacagtcggccccc
gtcaaagcgcaggcccctcccaagcctgagcggtcgcaaagcgtccgagagcagcagcag
cactacagccaagccaccatgcccgaaccagacagagaatactcataccagccccacggt
gggcagcagagacacagcaccatgacggtgcagtcccactacgacaacatggatgactac
cacccagcagcagtacctcagccacaggccctcatgccaaacccccatgggggctcctct
ggctctttccccaccaaccctggcttcacaggtagccacagcaacagagcgtactccact
gccttgggccagggtgccttcatcccagctgaactggccctgcagaggcccgagacagaa
atacacgcagaatga
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