Coregonus clupeaformis (lake whitefish): 121579328
Help
Entry
121579328 CDS
T08357
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121579328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121579328
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121579328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C2-set_3
C1-set
Adhes-Ig_like
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
121579328
NCBI-ProteinID:
XP_041749750
LinkDB
All DBs
Position
13:complement(14329892..14796983)
Genome browser
AA seq
440 aa
AA seq
DB search
MAITGNGSLATLLFLFMIPASLHKGAAQYPVQSQNLVTDNVAVVEGEVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGMSK
VEETYDHMFTVTSQLRFIVTKEDDSVPVVCIVDHPAVKDFQALTYLVVHYKPEVKIIVEF
PDGLPREGQNMELSCQAKGKPHPQQISWVKVDDDLPSHALITGADLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPKPTTATTTIPTTTISPPEATADTTPSAEPAAHDS
RAGEGAPRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADT
AIINAEGGHNNSDEKKEYYI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcatgattccagca
tctcttcacaaaggagctgctcagtacccagtccagagtcagaacctggtgacagacaat
gtggcggtggtggagggcgaggtggccgtcatcagctgcagggtgaagaacaacgacgac
tcggttatccagctcctcaaccccaacagacagaccatctacttcagagacgtccgaccc
ctgaaagatgcccgcttccagctggtcaacttctcggacaatgagctgcgggtgtctctg
tccaatgtgagcctgtcggatgaggggagatacgtgtgccagctctacacggacccccca
caggaggcctatgccgacatcactgtgctgatccctccaggcaacccaatcatcgaatcc
cgggaggggcaggtgattgagggcaacgagacagagatgacctgcactgctatgggcagc
aagcccgccgccacaatcagatggatgaagggagacaaagagctccaaggcatgtccaag
gtggaggagacgtatgaccacatgttcacggtgaccagccagctgaggttcatcgtcact
aaagaggatgacagcgttcccgtggtgtgcatcgtggaccacccagccgtcaaagacttc
caagccctgacgtacctggtggtacattataaaccggaggtgaagatcatagtggagttt
cctgatgggctgccaagagagggacagaacatggagctgtcgtgccaggccaaaggcaaa
ccccatccccagcagatcagctgggtgaaggtggacgacgaccttccctcacacgccctc
atcaccggcgcagacttgtacatcgagaacctcaacaagacctacaacggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgacgactacatcctctacgtctacgat
gcccccaccactacccctaaacccactacagctaccaccacaattcccaccaccaccatc
tctccccctgaagccactgcagacactacgcccagcgctgaacccgcagctcacgattcc
agagctggagagggagcaccgagagcagtcgaccatgcggtcatcggaggagtggtggct
gtggttgtctttgccatgctctgtctactcatcattttgggacggtactttgcaagacac
aaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagcagacgcagacacg
gccattatcaacgcagaggggggccacaacaattcggacgagaaaaaggagtactacata
tag
DBGET
integrated database retrieval system
