Coregonus clupeaformis (lake whitefish): 121579334
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Entry
121579334 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121579334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121579334
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Serotonin (5-HT3)
121579334
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121579334
NCBI-ProteinID:
XP_041749781
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Position
13
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AA seq
494 aa
AA seq
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MRGSALWTALVLLLIQGTAPACGVKKLGNITGRFANATLVRLSEYLSAGYKKGVRPVRNW
RNCTMVAIDLMVYSILSVDEKNQVLTTYVWYRQEWTDEFLVWNPEDFDDVNQISILTANV
WVPDILINEFVDVGKSPDIPYVYVTHYGLVRNYKPIQVVTACTLNIYNFPFDVQNCSLTF
QSWLHTLNDIDLKLMRSAEELKVDKSVFMNQGEWELLHVLSKYKRFSLDNIDSYAEMKFN
VVIRRRPLFYTVNLLLPSIFLMVMDLVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTL
PATAIGTPLIGVYFVVCMALLVISLTETVLIVRLVHKQDLQPHVPQWLKHLVLERATVLL
CIRNKHSLCSMLSQDSDHLGHYKENNISPALCNHHLHHTCEIGRGGADSVEQGLGGLVVL
PVVRDTTQPVMDNILHEISSIRGFLEKRDECRDIAKEWLQVGYMLDVLLFRVYLVAMLAY
SITLGTLWSVWQYA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcagcactctggacagcgcttgtcctgctcctgatacaaggcaccgcgcca
gcctgcggagtcaagaaactgggcaatattaccggacgctttgccaatgccaccttagta
cgtctctccgagtacttgagtgctgggtacaagaagggggttcgacccgtgcgcaactgg
cgaaattgtacaatggtggccatcgaccttatggtgtactctatcctcagtgtggacgag
aagaaccaggttctgacaacatatgtatggtacaggcaggaatggacagatgaattcttg
gtatggaacccagaggactttgatgatgtgaatcaaatatccatactgactgccaatgtg
tgggtgcctgacatactaatcaacgagtttgtggatgtgggaaagtctccggatattccc
tatgtgtacgtgacccattatggactggtgcgcaactacaagcccatccaggtggtgaca
gcctgcactctcaacatctacaacttcccctttgacgtccagaactgcagcctgaccttc
cagagctggctccatacccttaatgacatcgacctcaagctgatgagaagcgcagaggaa
ctcaaagtggacaagagtgtcttcatgaaccagggggagtgggagctgctacacgtcctg
tccaaatacaaacgcttcagtctggacaacattgactcctatgccgagatgaagttcaat
gtggtgatccgacgcagacctctgttctacactgtgaacctgttgctgcccagcatcttc
ctgatggtgatggacctggtgggcttctacctccccccggacagcggagagagggtgtcc
ttcaagatcaccctgctcctgggctactccgtcttcctcatcatcgtctccgacacgctg
cccgccaccgccatcggcacgccgctcataggtgtatactttgtagtgtgcatggctctg
ttggtgatcagcctgacagagacagtgttgatagtgcgtctggtgcataagcaggacctg
cagccccacgtgccccagtggctcaaacacttggtgctggagcgggccacggtcctcctc
tgcatccgcaacaagcacagcctgtgctccatgctgtcccaggactccgaccacctgggc
cattacaaagagaacaacatcagcccggctctatgtaaccaccaccttcaccacacctgc
gagatcggccgtggcggcgcagacagtgtggagcagggtctggggggcctggtggtcctg
cccgtggtgcgcgacaccacgcagcctgtcatggacaacatcttgcatgagatctcgtcc
atccgcggcttcctggagaagagggacgagtgccgggacattgccaaggagtggctgcag
gtgggctacatgctggacgtgctgctcttcagggtctacttggtggccatgctggcctac
agcatcaccctggggaccctctggtctgtgtggcagtatgcatga
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