KEGG   Coregonus clupeaformis (lake whitefish): 121579339
Entry
121579339         CDS       T08357                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121579339 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121579339 (polr1e)
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     121579339 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49 PIN-TPR-GreABC
Other DBs
NCBI-GeneID: 121579339
NCBI-ProteinID: XP_045079301
LinkDB
Position
1:complement(91433040..91451309)
AA seq 417 aa
MEANCTLVCCEEERETDKAVIVQFSNGNLRNTEQLDFSFYKNMDETNPRKKHRRMLVAES
DRLSYVGNNFGTGSLKCNNLCKYYVGVLNKETMRMEVHSAQLFNMQPIIPGESSTANDAS
QNTDLTYREKVDSLIEAFGTNKQKRALSSRRLNQVGSETLQSAVAKAAHSVIDQKGLEAL
QQEVTQTESQSEVSHYLPPCYPDADTPQHVYLFDDILSPVEYDALDAAGSKMAALTPEEL
QKMTDDGGCLSVVRQLETLPREGVARERRARCAFYLHLLLRLARQKNITRKFGQEEGCPH
IIQKKLMRTFTVETFNNGRVQNVVSTSMRVKVAAYCLTLLLHMGDMTSDLTLLHRDLGVT
EKRIVEVAKSMGLTLVRHACVKGDDAGPTAENRLASLVLPLVKYQPFSEIRKRKRMR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggaggcaaactgcacgttggtttgctgtgaagaggagagagaaaccgataaagctgtt
attgttcagttctctaatggcaacctgagaaacacggagcagctggacttcagcttctac
aagaacatggacgagaccaaccccaggaagaagcaccgacgcatgctggttgcagaatca
gacagactctcctatgttgggaataactttggaacgggatccctaaagtgcaacaacctt
tgcaagtattatgtgggggtgctgaacaaggagaccatgaggatggaggtgcacagcgct
caactcttcaacatgcagcccatcatcccaggggagtcgtctacagcgaatgatgcgtcc
cagaacacagatctaacatacagggagaaggtggactctctgatcgaggcgtttggcacc
aacaagcagaagagagctctgagctccaggaggctgaaccaggtgggcagtgagaccctg
cagagtgcagtagccaaggctgcccactccgtcatcgaccagaagggcctggaagctctg
cagcaggaggtgactcagacagagtcccagtctgaagtatctcattaccttcctccctgc
taccccgacgctgacacacctcaacacgtctacctgtttgacgacatcctgtctccagtg
gagtatgatgccctggatgctgctggttctaagatggccgccctgaccccagaggaacta
cagaagatgacagacgatggagggtgtctgagcgtggtgcgtcagttggagaccctgcca
agagagggcgtggccagagagagacgggcgcgctgtgccttctacctccacctgctgctc
aggctggcacggcagaaaaacatcactcgcaagttcgggcaggaggagggctgtcctcat
atcatccagaaaaagctgatgaggaccttcaccgtggagaccttcaacaacggcagggtg
cagaacgtggtgtccacgtcgatgcgtgtgaaggtggccgcgtactgcctgaccctgctg
ctccacatgggggacatgacctctgacctcacactgctacacagagacctgggggtcaca
gagaaaaggatcgtggaggtggccaagtcgatggggctgaccctggtcagacatgcctgt
gtgaagggggacgatgctgggccgacggctgaaaacagactggcttccctggtgctcccc
ctcgtcaaataccaaccgttctcagagatacgcaaacgcaaaagaatgcggtag

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