Coregonus clupeaformis (lake whitefish): 121579352
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Entry
121579352 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121579352 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121579352
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121579352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
IL4_i_Ig
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
121579352
NCBI-ProteinID:
XP_041749808
LinkDB
All DBs
Position
13:complement(16540635..16620283)
Genome browser
AA seq
2076 aa
AA seq
DB search
MSNMKRQSSWQEDIGRNFSRLFQITKSQDPEKTEESNISEWNGVSSSLRSETSEGEPSLH
QEDLELSKAFQGTEEEGDGREGVLGEALEDRESKGKEKGGEGSSSISDDAGGSSEDLVPP
PSVDSVPCSPASPPGPSSPTRPPPLDAFFRRLGSLFHFKAEPTRAAQQQEEQQQAEEGGE
GQEEEETALAVVPIEPDLSGITCGAEGDQDHYDSAGRLTGEKDTRHTETEDRREGESDLH
SVSTSTDLETLEKPIRALEETQAKGHRGGCREGEAAADSSPLSEVEAAVDEHQRRLALAC
PPVVTYGTYRGQGDKRRMRRRHQVQVECPTSGVEGSPLGGVTPSTLELAISKQRDIQTVS
TNQIGAPTSETNERGAWTSETDSAVLGPTGPESSHIPLTTHTAERAGSQSAFPLLGETDL
ATVGGQANDSLSGVGSVTGPPPAPTEDSADAGTSTAVSETHSVEQSPRDKITHTEMASED
TDRDTDGDRDTGLSEQTETLSAHCFQTGSPSFAAAAAAAWPGAGGTAQHTHLPAAVSDGD
GGQLAPHPISPSALLLSVTESQGLMPATRHSDSGDALNSGPGAGLHCFESGKEEGDVGPP
DDLFEEALHLESKMMVDNILINALAALEKIESSEEEGKVIQKASEETYLVLPVGREEEEE
GVDRSFEPDKLEEVGPSETGDDRHPSAIPAEQTLSLNPNPLAEGPRSTPSSGYESIAGSD
TDIRSSPGPACESSAPTIGVSDHRQGEHCAEGTQGTGHQLLVKGQRLMDAKANEQPQGEE
DSQLNDPIESVYSGDKHQRDVLPLLGGGVSLEKPGLYGDDGDINQVMRVSHEYESVSGKT
NENKDQVLGTLGDNGCNEVLGVKGTQVGDGAVHVAKDDIESNRHSPKQDCNAQYGHVSVS
NTSESPNKLKAFPEPDLLRKSSKYEAKGNSEADLMSVRPKHTHNSLEPSQVRHAISQKPI
ACITLYDEGQESGPEITLKVPQTETNGLNDIPVSGDQSFVLVETYLASVFSEGSDSGGEE
DEADSRPTGTISVDPSFSRRLPKDLSTSEGLVSNSAPDSSNEDRPQWSSVSAYRCDVSQQ
QQSQDSETPGHSGAGSAAAAVAGFHQDLGIRLAGLHTTGGRRAPGLEPLLPLLPVPQLAF
HDMETSGFSIIDEEEETDAVFVNDTGPMLSPTARRVKAYPFSLSPIVEEDSLRGEEVAEG
GLSQEDRGLMVPPATEELRSLSGGVGMEQVASSSSLSILSLLQSVSERLQSSGYSDTDAG
SEEPSTPPLRRPLWDFFNRGQAEAEEGDGQGMDGDQSSKQEGPSSLTLPTDLFTMGPRDG
DPTKDVKNLSTPRITIQKPADSPMYQYLKSVQPVLPEPDNDNSKHHAKLVPCLSDNNCSS
TATDMGGNWSYGKVIPRPTLMSIYDGVTFSGEMREIHRDQEDSGMVFPQGASVRVLGGCW
LLYLEPGFRGPGLLLEEGETVLSHQPGQQQASQGTEDKPTAITIGSIRRLVKDDGTPEIH
LLPSGAPGGATERFNSEVNSLGTCGGPIHLSNLTVKSGCWLAYASPGFHGNYAVMEAGGS
TTPGIGHPQVTTVRSLRPLRMSGLRVSRPLDPKMLVFEQPLFQGRGRELGGHTPSLGAVT
GMKGVSSLRVIGGVWVGYTGEDYTGWEYLLEEGEYSDCADLGGADHPLLLSFRFLQADFI
EPSVSLQEETSSPGAGRRDILDLDVPDLEKAGATEKTTTFCVKSGVWVAYSEQCFSGEQC
ILEKGKHPATLYWGGNHGAAKSIRPIRLQHLCCTGEPKFLLWAYSQPHYRGVSEEYKGEA
GHCGSASPMSFRVIRGSWLLFDEEGCCGNQYILGEGLYPDLISCGCVATSVKSLRPIPYS
FSDPSISLFSLGSFEGLKMVVVMPTDHMKDFFTQSLQVHSGLWVVYEYSNYKGRQMLLQP
GELPVWGEHSGWDTIGSLRPLKQPRLYVQVRSRALGSLLTSESDQDDSSPARVTLSPACS
LDTQRWLFTGGLLRCKASKACLSVIGGKATVGARVALWPEHGRTHQRWSLNHNGTISSHL
NHKLVLDLRGGTGFERDHLVVNEFATDQATQFWDIE
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacatgaaacgacaaagttcatggcaggaggatatcggccgaaacttttcaaga
ctttttcaaataactaagtcgcaggaccctgagaaaacagaggaaagcaacatcagtgaa
tggaatggagtcagcagcagcctccgcagtgagaccagtgaaggggagccatccctgcac
caagaagacctggagctgtccaaggcattccaaggcacggaagaagagggagacggaaga
gaaggagtgctgggagaggcactggaggacagagagagcaaaggaaaggagaaaggagga
gagggcagcagcagcatatcagacgatgcgggggggtcctccgaggacctcgtcccgccc
ccctcagtggactctgtgccttgctctccggcgagccccccggggcccagctctcccacg
cgtcctccccctttagatgccttcttcaggagactggggagtctgttccacttcaaggct
gaacccaccagagcagcccagcagcaggaagaacagcagcaggcagaggagggaggagaa
ggacaagaggaggaggagacagcattagcagtggtgcctattgagccagacctctcagga
attacatgtggtgcagagggggaccaggaccactatgactctgccgggaggctgacggga
gaaaaggacactcggcacacagagacagaggacaggagagagggagagtctgacctacac
agtgtatcgacgtccacagacctagagactctggagaaaccgatcagagccttggaggag
acgcaggcgaaaggccacaggggaggatgccgagagggcgaagcagcggcagacagcagc
ccgttgagcgaagttgaggcggcggtggacgagcatcagcggcgtctggccctggcctgt
ccgcctgtggtgacgtacgggacataccgtggccagggggacaaacgcaggatgaggcgg
aggcaccaggtgcaggtagaatgccccacctcaggtgtggagggcagccccttgggtggg
gtgacaccctccactttagaacttgccatttcaaagcagagggacattcagactgtatcg
accaatcagattggagctccaacctcagaaaccaatgagcgaggagcttggacttccgaa
acagactccgctgttttgggtccaactggacctgagtctagtcacattccactaacaaca
catacagcagaaagggctgggagtcaaagtgccttccctttactcggagagacagacctg
gctactgtaggaggccaggccaacgattctctctctggggttggatccgtcacaggcccc
cctcctgcacccacagaggactctgctgatgccgggactagtacagcagtcagtgagacc
cacagtgtagagcagagcccacgggataaaattactcatacggagatggccagcgaggac
actgacagggacacagacggggacagagacacagggctgagtgagcagacagaaacctta
tctgcacactgttttcagactgggtcaccttcatttgctgctgctgctgctgctgcgtgg
ccaggcgccggggggactgcacagcacacacatctgcctgccgctgtttccgatggagat
ggaggccagctggctccgcatcccatttcaccttctgccttgcttttatcagtgaccgaa
agccagggactcatgccagcaaccaggcactcagattctggtgatgcactgaattcaggc
cctggtgctggactgcactgctttgagtcagggaaggaggagggggacgttggtcctcca
gacgatctgtttgaggaggcccttcatttggagtctaaaatgatggtggataacattctg
attaatgctctagcggccctggagaaaatcgaatcctctgaggaggagggtaaagtgatc
cagaaggccagtgaggagacttacctggtcctacccgtaggcagagaggaggaggaggag
ggtgtggatcggtccttcgagccagataagctggaggaggtagggccttcagagacaggg
gatgacagacacccatcagccatcccggcagaacagactctctcattaaaccccaaccct
ctggcggagggccccaggtccaccccctcctcggggtacgagtctatcgcaggctcggac
actgacatcaggagcagccctgggccggcctgtgagagcagtgccccaaccatcggtgtc
tcagaccacaggcagggagaacactgtgccgaggggacccaaggcactggtcaccagcta
cttgtcaaaggtcaacggctaatggatgctaaagctaatgagcagccgcaaggggaagag
gattcccagctaaatgatcctattgaatctgtatacagtggcgataagcaccagagagat
gtgttgcctctcttgggcggtggagtgtccttagagaaaccaggtctctatggtgatgac
ggagatattaatcaagtaatgagagtgagtcatgagtatgagtctgtctcagggaaaact
aatgaaaacaaagatcaagtgctcggcactttaggggacaatggttgtaacgaggtgcta
ggcgttaaaggaacacaggtcggagacggcgcagtccacgtagccaaagatgatatcgaa
agcaatagacatagtcctaaacaagactgtaatgctcaatatggtcatgtttctgtgtcc
aatacctcggaaagtcccaataagctcaaagcatttcctgagcctgatctgcttaggaaa
agttccaaatatgaagctaagggcaattctgaggcagacctcatgtcagtcagaccaaaa
cacacccacaactcactagaaccatctcaagtcagacatgccataagtcagaagcctatt
gcctgtataactctttatgatgaaggccaagagagcggtcctgaaataacattgaaagtt
cctcagactgagaccaatgggctgaatgacatcccggtcagtggggatcaaagctttgta
ctggttgagacttacttagcctctgtgttctcagagggctctgactctgggggtgaagaa
gatgaggctgacagcagaccaacaggcaccatcagcgtggacccctctttttcaaggaga
cttcccaaggacctgagcacctcagagggccttgtgtctaattcagcccctgactccagt
aacgaggacaggccacagtggagctcggtgagcgcgtatcgatgcgacgtctctcagcag
cagcagagtcaggactcagagacaccgggacacagtggtgcaggttcagcagcagcagct
gtggcagggtttcaccaggacctgggcatcaggctagctgggctccatactacaggaggc
cggagagccccaggcctggaacctctcctccccctcctccccgtcccccagcttgccttc
cacgacatggagacgagtggtttctccatcatcgacgaggaggaggagacggatgcggtg
ttcgtcaatgacacaggccccatgctgagccccacggcgcggcgggtcaaggcctaccct
ttctccctgtctcccatcgtggaggaggacagtcttcgtggcgaggaggtggcggagggg
ggcctgtcgcaggaggacaggggcctcatggtgcccccagccacagaggagctgaggagt
ctgagtggaggtgtggggatggagcaggtagcctcatcctcctccttgtccatcctgtcc
ctgctgcagtcagtcagcgagcgcctgcagtccagcggctactccgacacagacgcaggc
tcagaggagccctccacccctcctctacggcgccccctatgggactttttcaacaggggc
caggcggaggctgaggagggggatggccagggaatggatggagaccaaagcagcaagcag
gagggcccaagctctctgacacttcctactgatttattcactatgggacctcgagatggg
gatccaacgaaggacgtgaagaatctttccacccctcggattacaatccaaaagcctgca
gattcacccatgtatcagtatttgaaatcagtgcagccagtgttgccagagcctgacaat
gacaacagtaaacatcatgccaaactcgttccgtgcctcagtgataacaactgttcatca
acagcaactgacatggggggaaattggagttatgggaaggtcatcccaaggcctacgctg
atgagcatctatgatggtgtgacgttctctggggagatgcgggagatccacagagaccag
gaggactctgggatggtgtttccgcagggtgcctcggtgcgagtcctgggaggatgctgg
ctgttgtacctggagccggggttccggggccccgggctgctgctggaggaaggggagaca
gtactgagccaccaaccaggtcagcagcaggccagccaggggacagaggacaagcccacc
gcaatcaccatcggctccatcagaagactagtgaaggatgacggcactccagaaatccat
ctgcttccgtccggagcgccaggaggagccacggaacgtttcaactcggaagtaaacagc
ttgggaacatgtggtggacctatccacctgtcaaacctgactgtcaagtctggctgttgg
cttgcctacgctagccctggtttccatgggaactatgcggttatggaagcaggcggctcc
acaacacctggcattggtcatccccaggtcaccactgtgaggtcactgagacccctcaga
atgagtgggctcagagtgagcagaccactggatcctaagatgttggtattcgagcagccc
ctcttccaggggcggggcagagagctgggaggccacacccccagtctgggagctgtgact
gggatgaagggggtgtcgtcgctacgggtcattggtggagtatgggtgggctacactgga
gaggactacacagggtgggagtatttactggaggagggagaatacagtgactgtgcagat
ctgggtggagccgatcaccctctgttgctttctttccgcttcttacaggcagacttcata
gagccctcagtctcactgcaggaggaaactagctcgcctggagccgggagaagggacatt
ttggatctggacgtccctgatctggagaaggctggagccactgaaaagaccaccaccttc
tgtgtgaagagtggagtatgggtggcgtatagcgagcaatgtttcagtggagagcagtgc
atactggagaaaggcaaacatcctgccactctgtactggggtggcaaccatggggcagcc
aagtctatccgacccatacgattgcagcacctttgttgcaccggagaaccaaagttcttg
ctgtgggcctacagccagccccactacaggggagtgagtgaggagtacaagggggaggca
gggcactgtggctctgcctcccccatgtccttcagagtcatcaggggaagctggctgctt
tttgatgaggagggttgctgtggaaaccagtacatcctgggagagggcctttatcctgac
ctcatttcctgtggctgtgtggccacttctgtcaaatcactgaggcccattccttatagt
ttctccgacccgtccatcagcctgttttccctgggttcctttgagggcctcaagatggtt
gttgtgatgcccacagaccacatgaaggacttcttcacccagtctctgcaggtccacagt
ggactgtgggtggtgtatgaatacagtaactataagggccgtcagatgctgctgcagcca
ggggagcttcctgtgtggggagagcacagtggctgggacaccattggctccttacggccc
ctcaaacagcccaggctgtatgtacaggtgaggagccgtgctctgggctcactgctaacc
tctgagagtgaccaggacgactcgtccccagccagagtgaccctgtccccggcctgctct
ctggacacccagcgctggctcttcactggaggactgctccgctgcaaggccagtaaggca
tgtctttcagtgatcggggggaaggccacagtgggggccagagtggccctgtggccggaa
catggacgcacacaccaaagatggagcctgaaccacaacggaaccatctcttcccatctc
aaccacaaactagtactggacttgagaggtggaacaggttttgagagggaccacctggtc
gtcaatgaatttgccactgatcaggccacacagttctgggacatagaataa
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