Coregonus clupeaformis (lake whitefish): 121579372
Help
Entry
121579372 CDS
T08357
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1 isoform X1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121579372 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121579372 (lrwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_8
LRR_9
Beta-prop_EML_2
LRR_4
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_SPT8
WD40_CDC20-Fz
Beta-prop_WDR5
LRR_1
LRR_14
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IP5PC_F
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121579372
NCBI-ProteinID:
XP_041749848
LinkDB
All DBs
Position
13:17639157..17660330
Genome browser
AA seq
768 aa
AA seq
DB search
MSATIHTLHMTKLAFTLCLYRLDMEKITKKLLLEKCTPKTTKLEQIKTLNLSKLGLKSSD
LPVPLLSHLRCLEQLDLSGNRLQEMPPGLFLPSLRTLDLTNNEMEDVTTLDTLTTLEELR
TEDNLYVTVNDDYKLMILLPKLRIYNGKDISTAANHIRYVNSENLRKRVLAVWETSFSLP
DHRTTEKLATVERDFVNAVRHKVKYGPSSLTDYTKWRVEMIAKEHLRSLTEPNDEDRDTE
EPADTNKNCSFPFPAKRKRSASAAECDVTLTPQKITRASVQAVSSHRSTPHKAEWPTSAT
ARPHKAAQTPATRTRVQSKVLVTPRKGLREQQHQSKEDMPQAKQTPTPTKSARQQRSTEV
NETPGKVICTKSQEPVSLQPLHVLQCHSKQDSPDDFSTQLWACSFQPPLDRYGDVNGATR
IVATCGGESVCLIDCETGLVMKKYKVPGEEFFSLAWSTVLMSREGNGGMRPCSILAAGGK
RGLVKLLHPSANMAYGEFRASRKALSILRFSPRQGNFLFTGSYDKNILMWDIGGVDSEYN
FKVIQLLVLETTSTPLHFCLPPATPDTHLIAACEDGLHSYNIQLNKDTRKRSEEMEITFP
VYEKKDKDHDYHTIDGLGFLTDDIVASKSHMQGSIYLWSWNDTRAQCPNNNNNNKKKKCA
VILAELQWSSTDIPYLSLNTCPSKGYVVCGDERGRLWTYHVTDLKANFRRGKTIPATEIL
EWPLPVRKGQGPVEGPAINSVVMDPELRYLVALSDKNMAVVWRRTESS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaccatacatactctacatatgaccaaactagcttttactctttgcttgtac
aggctagacatggagaaaataacaaagaaactattgctggagaaatgcactccaaaaacc
accaaactggaacaaataaagacactaaatctctccaagctcggtctgaagagcagtgac
ctgcctgtccccctgctttctcaccttcgctgtctggaacagttggacctgtctgggaac
agacttcaggagatgcccccggggctcttccttccctccctacgcactctggacctgacc
aacaatgagatggaggacgtcaccactctggacacactgaccaccctggaggagctgagg
acggaggacaacctctacgtcactgtgaatgacgactacaagctgatgatcctcctgcca
aagttgaggatttacaatgggaaggatatcagcactgcagccaaccacatacgctatgtc
aacagtgagaacctcaggaagagggtgttagcagtatgggagaccagcttctctctccct
gaccaccgaacaacagagaaactagccactgtggagagggattttgtcaatgcggtgcgt
cataaggtgaaatatggccccagctctctgactgactacacaaaatggagggtggagatg
atagctaaagagcaccttcgctctttgactgagccaaatgatgaggacagagatacagag
gagcctgctgatacaaacaagaactgtagttttcctttcccagccaagaggaagcgttcc
gcctcggctgccgaatgcgatgtaaccctaacccctcagaaaataaccagagcgagtgtt
caagcggtgtccagccatcgaagcacccctcacaaggcagagtggcccaccagcgccact
gcaaggccccataaggcagcacagaccccagccacccgcaccagggtccagtccaaagtt
ctggtgacccccaggaaaggcctgagagagcagcaacatcagtccaaagaagacatgcca
caggccaaacagacccccacccctaccaagtctgccaggcaacagcggtccacagaggtc
aacgagacgcctgggaaagtaatctgcaccaagtctcaggagccagtgagtctgcagcct
cttcatgtcctgcagtgtcacagtaaacaggacagccctgatgactttagcacccagctg
tgggcctgttccttccagcccccgctagaccgctatggagatgtgaatggtgcgactcgt
attgtggcaacgtgtggaggagagtctgtgtgcctgatcgactgtgagacgggactagtt
atgaagaagtataaggtccctggtgaggagttcttctctctggcatggtcaactgtgctg
atgtcacgagagggcaatggtggcatgcggccctgcagtatcctggcggcaggggggaag
cgaggccttgtgaaactgcttcaccccagcgccaacatggcgtacggagagttccgagcc
agccgcaaagccctctccatcctccgcttcagcccccgccagggcaacttcctcttcact
gggtcgtatgataaaaatatattaatgtgggacattggcggagtggacagcgagtacaat
ttcaaagtcattcagctgttggtgttggagactacctccacacccctgcacttctgcttg
ccccccgccaccccagacacacacctcatcgctgcctgtgaggatgggctgcacagctac
aacatccagctcaacaaagacaccaggaagaggtctgaggagatggagatcacattccct
gtgtatgagaagaaagacaaggaccatgactaccacaccatcgatggcttgggattcctc
acagacgacatcgtcgcctctaagagccacatgcagggctcgatttacctgtggagctgg
aatgacacgcgagcccagtgccccaataataataataataataagaagaagaagtgtgct
gtgatcctggcggagctgcagtggtccagcacggacatcccctacctgtccctcaacacc
tgccccagtaaaggctacgtggtgtgtggtgacgaaagagggagactgtggacgtaccat
gtaacagacctcaaggccaactttaggcgtggcaaaacaattcctgccacagagatcctg
gaatggccgttacctgtgaggaaaggacagggcccagtggaaggtcccgctatcaacagt
gtggtcatggaccccgagctcagatacctggtggccctcagcgacaagaacatggcagtg
gtgtggagaagaacggagtcttcctga
DBGET
integrated database retrieval system
